(Q36446402)

14 August 2017

Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses (English)

1 reference

14 August 2017

Thalassiosira pseudonana

object named as

Thalassiosira pseudonana

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

15

E Virginia Armbrust

1 reference

14 August 2017

Thomas Mock

1

1 reference

14 August 2017

Manoj Pratim Samanta

2

1 reference

14 August 2017

Vaughn Iverson

3

1 reference

14 August 2017

Chris Berthiaume

4

1 reference

14 August 2017

Matthew Robison

5

1 reference

14 August 2017

Karie Holtermann

6

1 reference

14 August 2017

Colleen Durkin

7

1 reference

14 August 2017

Sandra Splinter Bondurant

8

1 reference

14 August 2017

Kathryn Richmond

9

1 reference

14 August 2017

Matthew Rodesch

10

1 reference

14 August 2017

Toivo Kallas

11

1 reference

14 August 2017

Edward L Huttlin

12

1 reference

14 August 2017

Francesco Cerrina

13

1 reference

14 August 2017

Michael R Sussman

14

1 reference

14 August 2017

language of work or name

English

0 references

publication date

22 January 2008

1 reference

Proceedings of the National Academy of Sciences of the United States of America

14 August 2017

1 reference

14 August 2017

105

1 reference

14 August 2017

5

1 reference

14 August 2017

1579-1584

1 reference

Mesoscale iron enrichment experiments 1993-2005: synthesis and future directions

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Analysis of Thalassiosira pseudonana silicon transporters indicates distinct regulatory levels and transport activity through the cell cycle

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

A silicon transporter in rice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Global identification of noncoding RNAs in Saccharomyces cerevisiae by modulating an essential RNA processing pathway

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

A two-sample Bayesian t-test for microarray data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Identification of proteins from a cell wall fraction of the diatom Thalassiosira pseudonana: insights into silica structure formation.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Antisense transcription in the mammalian transcriptome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

InterProScan: protein domains identifier

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Silica morphogenesis by alternative processing of silaffins in the diatom Thalassiosira pseudonana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Open source clustering software

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

MicroRNAs: genomics, biogenesis, mechanism, and function

30 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

30 September 2017

https://api.crossref.org/works/10.1073%2FPNAS.0707946105

Components and Control of Silicification in Diatoms

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Biosilica formation in diatoms: Characterization of native silaffin-2 and its role in silica morphogenesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Q-Gene: processing quantitative real-time RT-PCR data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Genomic gene clustering analysis of pathways in eukaryotes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

BLAT—The BLAST-Like Alignment Tool

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

The COG database: new developments in phylogenetic classification of proteins from complete genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Species-specific polyamines from diatoms control silica morphology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Operons in Escherichia coli: genomic analyses and predictions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Probability-based protein identification by searching sequence databases using mass spectrometry data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Maskless fabrication of light-directed oligonucleotide microarrays using a digital micromirror array

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Primary Production of the Biosphere: Integrating Terrestrial and Oceanic Components

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Comparison of the consensus sequence flanking translational start sites in Drosophila and vertebrates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Eukaryotic start and stop translation sites.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

A gene family of silicon transporters.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Comparison of full versus partial metabolic labeling for quantitative proteomics analysis in Arabidopsis thaliana.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Silica immobilization of an enzyme through genetic engineering of the diatom Thalassiosira pseudonana.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Prediction of error associated with false-positive rate determination for peptide identification in large-scale proteomics experiments using a combined reverse and forward peptide sequence database strategy

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Self-assembly of highly phosphorylated silaffins and their function in biosilica morphogenesis

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Polycationic peptides from diatom biosilica that direct silica nanosphere formation.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2234187

Synthesis of iron fertilization experiments: From the Iron Age in the Age of Enlightenment

21 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0707946105

A switch from Si(OH)4to NO3−depletion in the glacial Southern Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0707946105

Architecture and material properties of diatom shells provide effective mechanical protection

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0707946105

Iron-limited diatom growth and Si:N uptake ratios in a coastal upwelling regime

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0707946105

21 January 2018

Identifiers

DOI

10.1073/PNAS.0707946105

1 reference

14 August 2017

0 references

1 reference

14 August 2017

1 reference