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Deep metaproteomic analysis of human salivary supernatant.
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scholarly article
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Europe PubMed Central
PMC publication ID
3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
title
Deep metaproteomic analysis of human salivary supernatant
(English)
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Europe PubMed Central
PMC publication ID
3517020
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29 January 2020
main subject
metaproteomics
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author
Pratik D. Jagtap
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1
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
Timothy Griffin
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6
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
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Thomas McGowan
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
Sricharan Bandhakavi
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3
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3517020
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29 January 2020
Zheng Jin Tu
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4
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
Sean Seymour
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5
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Europe PubMed Central
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
Joel D Rudney
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7
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3517020
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29 January 2020
publication date
1 April 2012
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29 January 2020
published in
Proteomics
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3517020
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29 January 2020
volume
12
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3517020
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29 January 2020
issue
7
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
page(s)
992-1001
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3517020
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
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29 January 2020
cites work
Integrative analysis of environmental sequences using MEGAN4
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Identification of biofilm matrix-associated proteins from an acid mine drainage microbial community.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Comparative metaproteomic analysis on consecutively Rehmannia glutinosa-monocultured rhizosphere soil
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Proteomics in the microbial sciences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Proteogenomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Characterization of metaproteomics in crop rhizospheric soil
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Dental plaque biofilms: communities, conflict and control
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
The human oral microbiome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Analysis of oral microbiota in children with dental caries by PCR-DGGE and barcoded pyrosequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Bacterial diversity in the oral cavity of 10 healthy individuals
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
A metaproteomic analysis of the human salivary microbiota by three-dimensional peptide fractionation and tandem mass spectrometry.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Defining the healthy"core microbiome" of oral microbial communities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
A dynamic range compression and three-dimensional peptide fractionation analysis platform expands proteome coverage and the diagnostic potential of whole saliva
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Comparisons of subgingival microbial profiles of refractory periodontitis, severe periodontitis, and periodontal health using the human oral microbe identification microarray
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Identification of salivary mucin MUC7 binding proteins from Streptococcus gordonii
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Comparative analysis of human saliva microbiome diversity by barcoded pyrosequencing and cloning approaches
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Global diversity in the human salivary microbiome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Tandem mass spectrometry with ultrahigh mass accuracy clarifies peptide identification by database retrieval
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
The proteomes of human parotid and submandibular/sublingual gland salivas collected as the ductal secretions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Bacteria of dental caries in primary and permanent teeth in children and young adults
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Saliva: a dynamic proteome.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Flamingo cadherin: a putative host receptor for Streptococcus pneumoniae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
MEGAN analysis of metagenomic data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Metaproteomics approach to study the functionality of the microbiota in the human infant gastrointestinal tract
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
From genomics to chemical genomics: new developments in KEGG
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Parts per million mass accuracy on an Orbitrap mass spectrometer via lock mass injection into a C-trap
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
The salivary microbiota as a diagnostic indicator of oral cancer: a descriptive, non-randomized study of cancer-free and oral squamous cell carcinoma subjects
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Surface analyses and immune reactivities of major cell wall-associated proteins of group a streptococcus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
The International Protein Index: an integrated database for proteomics experiments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Glyceraldehyde-3-phosphate dehydrogenase of Streptococcus oralis functions as a coadhesin for Porphyromonas gingivalis major fimbriae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Effect of acidic pH on expression of surface-associated proteins of Streptococcus oralis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Diversity of bacterial populations on the tongue dorsa of patients with halitosis and healthy patients
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
Altered protein expression of Streptococcus oralis cultured at low pH revealed by two-dimensional gel electrophoresis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
A major surface protein on group A streptococci is a glyceraldehyde-3-phosphate-dehydrogenase with multiple binding activity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
30 September 2017
A metaproteomic approach gives functional insights into anaerobic digestion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
28 June 2018
Proteomic analysis and identification of Streptococcus pyogenes surface-associated proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
28 June 2018
Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm community.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
When less can yield more - Computational preprocessing of MS/MS spectra for peptide identification.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Computational principles of determining and improving mass precision and accuracy for proteome measurements in an Orbitrap.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Pyrosequencing analysis of the oral microflora of healthy adults
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Nonlinear fitting method for determining local false discovery rates from decoy database searches.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
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The Paragon Algorithm, a next generation search engine that uses sequence temperature values and feature probabilities to identify peptides from tandem mass spectra.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
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Potential for false positive identifications from large databases through tandem mass spectrometry.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Distribution of selected bacterial species on intraoral surfaces
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
pH-regulated secretion of a glyceraldehyde-3-phosphate dehydrogenase from Streptococcus gordonii FSS2: purification, characterization, and cloning of the gene encoding this enzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
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Trends in oral cancer rates in the United States, 1973-1996.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517020
retrieved
21 September 2018
Shotgun metaproteomics of the human distal gut microbiota
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1002%2FPMIC.201100503
retrieved
21 January 2018
Identifiers
DOI
10.1002/PMIC.201100503
1 reference
stated in
Europe PubMed Central
PMC publication ID
3517020
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
PMC publication ID
3517020
1 reference
stated in
Europe PubMed Central
PMC publication ID
3517020
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
PubMed publication ID
22522805
1 reference
stated in
Europe PubMed Central
PMC publication ID
3517020
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22522805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
29 January 2020
ResearchGate publication ID
224811324
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