(Q36454217)

14 August 2017

The Rice Annotation Project Database (RAP-DB): 2008 update (English)

1 reference

14 August 2017

0 references

49

1 reference

14 August 2017

74

Tatiana Tatusova

0 references

Karen Christie

81

Karen R Christie

1 reference

14 August 2017

Tsuyoshi Tanaka

2

0 references

Yao-Cheng Lin

Yao-Cheng Lin

39

0 references

Kanako O Koyanagi

Kanako O Koyanagi

50

0 references

Takeshi Itoh

Takeshi Itoh

10

0 references

Claire O'Donovan

Claire C O'Donovan

47

0 references

Rod A. Wing

Rod A Wing

85

0 references

Takashi Gojobori

38

Takashi Gojobori

1 reference

14 August 2017

36

Kazuho Ikeo

1 reference

14 August 2017

46

David Lonsdale

1 reference

14 August 2017

87

Pamela J Green

1 reference

14 August 2017

80

Joachim Messing

1 reference

14 August 2017

32

Chisato Yamasaki

1 reference

14 August 2017

76

Gynheung An

1 reference

14 August 2017

69

Katsumi Sakata

1 reference

14 August 2017

70

Roberto A Barrero

1 reference

14 August 2017

14

Takuya Habara

1 reference

14 August 2017

16

Masako Kanno

1 reference

14 August 2017

20

Akihiro Matsuya

1 reference

14 August 2017

22

Naomi Saichi

1 reference

14 August 2017

23

Ryoko Sanbonmatsu

1 reference

14 August 2017

29

Fusano Todokoro

1 reference

14 August 2017

35

Masahito Tada

1 reference

14 August 2017

66

Hajime Ohyanagi

1 reference

14 August 2017

28

Motohiko Tanino

1 reference

14 August 2017

8

Hiroaki Sakai

1 reference

14 August 2017

Antonio Baltazar-Raigosa

3

Baltazar A Antonio

1 reference

14 August 2017

6

Yoshiaki Nagamura

1 reference

14 August 2017

33

Tadashi Imanishi

1 reference

14 August 2017

11

Takuji Sasaki

1 reference

14 August 2017

37

Yoshio Tateno

1 reference

14 August 2017

Rice Annotation Project

1

Rice Annotation Project

1 reference

14 August 2017

55

Georg Haberer

1 reference

14 August 2017

15

Erimi Harada

1 reference

14 August 2017

63

Douglas R Hoen

1 reference

14 August 2017

57

Satomi Hosokawa

1 reference

14 August 2017

Yue-Ie Caroline Hsing

41

Yue-ie Hsing

1 reference

14 August 2017

59

Hiroshi Ikawa

1 reference

14 August 2017

58

Yukiyo Ito

1 reference

14 August 2017

18

Hiroaki Kawashima

1 reference

14 August 2017

51

Jitendra P Khurana

1 reference

14 August 2017

4

Shoshi Kikuchi

1 reference

14 August 2017

19

Hiromi Kubooka

1 reference

14 August 2017

82

Damien Lieberherr

1 reference

14 August 2017

65

Nobukazu Namiki

1 reference

14 August 2017

7

Hisataka Numa

1 reference

14 August 2017

34

Toshihisa Okido

1 reference

14 August 2017

52

Saurabh Raghuvanshi

1 reference

14 August 2017

67

Yasumichi Sakai

1 reference

14 August 2017

60

Michie Shibata

1 reference

14 August 2017

25

Yuji Shinso

1 reference

14 August 2017

73

Brian Smith-White

1 reference

14 August 2017

27

Jun-ichi Takeda

1 reference

14 August 2017

54

Akhilesh K Tyagi

1 reference

14 August 2017

21

Hajime Nakaoka

1 reference

14 August 2017

Takashi Matsumoto

5

1 reference

14 August 2017

Jianzhong Wu

9

1 reference

14 August 2017

Ryo Aono

12

1 reference

14 August 2017

Yasuyuki Fujii

13

1 reference

14 August 2017

Yoshihiro Kawahara

17

1 reference

14 August 2017

Yoshiharu Sato

24

1 reference

14 August 2017

Mami Suzuki

26

1 reference

14 August 2017

Kaori Yamaguchi

30

1 reference

14 August 2017

Naoyuki Yamamoto

31

1 reference

14 August 2017

Fu-Jin Wei

40

1 reference

14 August 2017

Qiang Zhao

42

1 reference

14 August 2017

Bin Han

43

1 reference

14 August 2017

Melissa R Kramer

44

1 reference

14 August 2017

Richard W McCombie

45

1 reference

14 August 2017

Eleanor J Whitfield

48

1 reference

14 August 2017

Nagendra K Singh

53

1 reference

14 August 2017

Masaki Fujisawa

56

1 reference

14 August 2017

Mayu Yamamoto

61

1 reference

14 August 2017

Richard M Bruskiewich

62

1 reference

14 August 2017

Thomas E Bureau

64

1 reference

14 August 2017

Satoshi Nobushima

68

1 reference

14 August 2017

Yutaka Sato

71

1 reference

14 August 2017

Alexandre Souvorov

72

1 reference

14 August 2017

Suyoung An

75

1 reference

14 August 2017

Satoshi OOta

77

1 reference

14 August 2017

Galina Fuks

78

1 reference

14 August 2017

Galina Fuks

79

1 reference

14 August 2017

HyeRan Kim

83

1 reference

14 August 2017

Andrea Zuccolo

84

1 reference

14 August 2017

Kan Nobuta

86

1 reference

14 August 2017

Cheng Lu

88

1 reference

14 August 2017

Blake C Meyers

89

1 reference

14 August 2017

Cristian Chaparro

90

1 reference

14 August 2017

Benoit Piegu

91

1 reference

14 August 2017

Olivier Panaud

92

1 reference

14 August 2017

Manuel Echeverria

93

1 reference

14 August 2017

language of work or name

English

0 references

publication date

17 December 2007

1 reference

14 August 2017

Nucleic Acids Research

1 reference

14 August 2017

36

1 reference

14 August 2017

D1028-33

1 reference

14 August 2017

Database issue

1 reference

Global identification and characterization of transcriptionally active regions in the rice genome

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

An expression atlas of rice mRNAs and small RNAs

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Birth and death of genes promoted by transposable elements in Oryza sativa

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

The TIGR Rice Genome Annotation Resource: improvements and new features

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

RetrOryza: a database of the rice LTR-retrotransposons

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

MicroRNAS and their regulatory roles in plants

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

RMD: a rice mutant database for functional analysis of the rice genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

OryGenesDB: a database for rice reverse genetics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Gramene: a bird's eye view of cereal genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

miRBase: microRNA sequences, targets and gene nomenclature

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

The map-based sequence of the rice genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

High throughput T-DNA insertion mutagenesis in rice: a first step towards in silico reverse genetics.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Analysis of the transcriptional complexity of Arabidopsis thaliana by massively parallel signature sequencing

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

A uniform system for microRNA annotation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

The generic genome browser: a building block for a model organism system database

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

A comprehensive rice transcript map containing 6591 expressed sequence tag sites

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

A high-density rice genetic linkage map with 2275 markers using a single F2 population.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

A bidirectional gene trap construct suitable for T-DNA and Ds-mediated insertional mutagenesis in rice (Oryza sativa L.).

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

EU-OSTID: a collection of transposon insertional mutants for functional genomics in rice.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Generation of T-DNA tagging lines with a bidirectional gene trap vector and the establishment of an insertion-site database.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Rapid, large-scale generation of Ds transposant lines and analysis of the Ds insertion sites in rice.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Establishing an efficient Ac/Ds tagging system in rice: large-scale analysis of Ds flanking sequences.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Generation and analysis of end sequence database for T-DNA tagging lines in rice.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

Target site specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

T-DNA insertional mutagenesis for functional genomics in rice.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238920

mazF, a novel counter-selectable marker for unmarked chromosomal manipulation in Bacillus subtilis.

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKM978

A rice gene activation/knockout mutant resource for high throughput functional genomics

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18089549

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKM978

1 reference

14 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 August 2017

1 reference