(Q36458227)

English

Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+ (English)

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

object named as

Yi-Sheng Cheng

7

0 references

author name string

Lyudmila G Doudeva

1

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Hsinchin Huang

2

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Kuo-Chiang Hsia

3

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Zhonghao Shi

4

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Chia-Lung Li

5

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Yongliang Shen

6

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Hanna S Yuan

8

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

publication date

1 February 2006

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Protein Science

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

15

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

2

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

269-280

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

Understanding how cells allocate metals using metal sensors and metallochaperones

1 reference

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30 September 2017

Real-time monitoring of enzymatic DNA hydrolysis by electrospray ionization mass spectrometry.

1 reference

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30 September 2017

Structural and functional insight into sugar-nonspecific nucleases in host defense

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

DNA binding and cleavage by the HNH homing endonuclease I-HmuI

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

DNA binding and degradation by the HNH protein ColE7

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active site

1 reference

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30 September 2017

Principles governing Mg, Ca, and Zn binding and selectivity in proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Metal ions and phosphate binding in the H-N-H motif: Crystal structures of the nuclease domain of ColE7/Im7 in complex with a phosphate ion and different divalent metal ions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The crystal structure of the nuclease domain of colicin E7 suggests a mechanism for binding to double-stranded DNA by the H-N-H endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Mutagenic scan of the H-N-H motif of colicin E9: implications for the mechanistic enzymology of colicins, homing enzymes and apoptotic endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Probing metal ion binding and conformational properties of the colicin E9 endonuclease by electrospray ionization time-of-flight mass spectrometry.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The zinc ion in the HNH motif of the endonuclease domain of colicin E7 is not required for DNA binding but is essential for DNA hydrolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Mechanism and cleavage specificity of the H-N-H endonuclease colicin E9.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Homing endonucleases: structural and functional insight into the catalysts of intron/intein mobility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Femtomolar sensitivity of metalloregulatory proteins controlling zinc homeostasis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Zinc finger proteins: new insights into structural and functional diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Recognition of distorted DNA structures by HMG domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

A novel endonuclease mechanism directly visualized for I-PpoI

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The active site of Serratia endonuclease contains a conserved magnesium-water cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

X-ray structure of T4 endonuclease VII: a DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

DNA binding and cleavage by the nuclear intron-encoded homing endonuclease I-PpoI

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The crystal structure of the immunity protein of colicin E7 suggests a possible colicin-interacting surface

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Substrate binding and turnover by the highly specific I-PpoI endonuclease.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Self-splicing group I and group II introns encode homologous (putative) DNA endonucleases of a new family

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

DNA recognition by DNase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

Manipulation of intracellular magnesium content in polymyxin B nonapeptide-sensitized Escherichia coli by ionophore A23187.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

30 September 2017

The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

1 reference

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30 September 2017

Distinct conformational stability and functional activity of four highly homologous endonuclease colicins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

28 June 2018

Protein-DNA interactions: A structural analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

28 June 2018

Structural features of protein-nucleic acid recognition sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

28 June 2018

Amino acid sequence motif of group I intron endonucleases is conserved in open reading frames of group II introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

28 June 2018

How to hide zinc in a small protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

21 September 2018

Structure-based analysis of the metal-dependent mechanism of H-N-H endonucleases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

21 September 2018

Multistep binding of transition metals to the H-N-H endonuclease toxin colicin E9.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2242460

21 September 2018

Structural and mechanistic basis of immunity toward endonuclease colicins

1 reference

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21 September 2018

Homing in on the role of transition metals in the HNH motif of colicin endonucleases

1 reference

https://pubmed.ncbi.nlm.nih.gov/16434744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A similar active site for non-specific and specific endonucleases

1 reference

https://pubmed.ncbi.nlm.nih.gov/16434744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural parsimony in endonuclease active sites: should the number of homing endonuclease families be redefined?

1 reference

https://pubmed.ncbi.nlm.nih.gov/16434744

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.051903406

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

14 August 2017

ResearchGate publication ID

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