(Q36524364)

English

The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small

scientific article published on October 1998

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scholarly article

1 reference

Europe PubMed Central

14 August 2017

The optimization principle in phylogenetic analysis tends to give incorrect topologies when the number of nucleotides or amino acids used is small (English)

1 reference

Europe PubMed Central

14 August 2017

1 reference

based on heuristic

inferred from title

1

object named as

Nei M

1 reference

Europe PubMed Central

14 August 2017

author name string

Kumar S

2

1 reference

Europe PubMed Central

14 August 2017

Takahashi K

3

1 reference

Europe PubMed Central

14 August 2017

language of work or name

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publication date

1 October 1998

1 reference

Europe PubMed Central

14 August 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

14 August 2017

95

1 reference

Europe PubMed Central

14 August 2017

12390-12397

1 reference

Europe PubMed Central

14 August 2017

21

1 reference

Europe PubMed Central

14 August 2017

Using mitochondrial and nuclear DNA markers to reconstruct human evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

The major compositional transitions in the vertebrate genome

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

https://api.crossref.org/works/10.1073%2FPNAS.95.21.12390

21 January 2018

A stepwise algorithm for finding minimum evolution trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Rates of nucleotide substitution in primates and rodents and the generation-time effect hypothesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

fastDNAmL: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Success of maximum likelihood phylogeny inference in the four-taxon case

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

High resolution of human evolutionary trees with polymorphic microsatellites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Phylogenetic analysis. Models and estimation procedures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Construction of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Accuracy of phylogenetic trees estimated from DNA sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Phylogenies from molecular sequences: inference and reliability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Animal mitochondrial DNA: structure and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Higher rates of amino acid substitution in rodents than in humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Phylogenetic analysis in molecular evolutionary genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Bootstrap confidence levels for phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

30 September 2017

Phylogenetic analysis using parsimony and likelihood methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

When is it safe to use an oversimplified substitution model in tree-making?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

Interior-branch and bootstrap tests of phylogenetic trees.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

Property and efficiency of the maximum likelihood method for molecular phylogeny.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

The number of nucleotides required to determine the branching order of three species, with special reference to the human-chimpanzee-gorilla divergence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

Human origins and analysis of mitochondrial DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

Human origins and analysis of mitochondrial DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

28 June 2018

Evolutionary relationships of human populations on a global scale

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

21 September 2018

Theoretical foundation of the minimum-evolution method of phylogenetic inference.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

21 September 2018

Relative efficiencies of the maximum-likelihood, neighbor-joining, and maximum-parsimony methods when substitution rate varies with site.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22842

21 September 2018

Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.21.12390

21 January 2018

Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.21.12390

21 January 2018

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.21.12390

21 January 2018

Inconsistency of the Maximum-parsimony Method: the Case of Five Taxa With a Molecular Clock

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.95.21.12390

21 January 2018

Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/9770497

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

On the maximum likelihood method in molecular phylogenetics

1 reference

https://pubmed.ncbi.nlm.nih.gov/9770497

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relative efficiencies of the maximum parsimony and distance-matrix methods in obtaining the correct phylogenetic tree

1 reference

https://pubmed.ncbi.nlm.nih.gov/9770497

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How often do wrong models produce better phylogenies?

1 reference

https://pubmed.ncbi.nlm.nih.gov/9770497

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.95.21.12390

1 reference

Europe PubMed Central

14 August 2017

1998PNAS...9512390N

0 references

1 reference

Europe PubMed Central

14 August 2017

1 reference

Europe PubMed Central

14 August 2017

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