(Q36539395)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

title

Robust enumeration of cell subsets from tissue expression profiles (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

main subject

cell type deconvolution

0 references

author

Aaron M. Newman

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Michael Green

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Andrew J Gentles

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

A Alizadeh

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

2

Chih Long Liu

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

8

Maximilian Diehn

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

author name string

Weiguo Feng

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Yue Xu

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Chuong D Hoang

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

publication date

30 March 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

volume

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

issue

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

page(s)

453-457

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

4 March 2020

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/4739640

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.3337

0 references

cites work

Active idiotypic vaccination versus control immunotherapy for follicular lymphoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Computational deconvolution: extracting cell type-specific information from heterogeneous samples

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Inferring tumour purity and stromal and immune cell admixture from expression data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

MMAD: microarray microdissection with analysis of differences is a computational tool for deconvoluting cell type-specific contributions from tissue samples

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

A self-directed method for cell-type identification and separation of gene expression microarrays.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Digital sorting of complex tissues for cell type-specific gene expression profiles

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Neutralizing tumor-promoting chronic inflammation: a magic bullet?

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

PERT: a method for expression deconvolution of human blood samples from varied microenvironmental and developmental conditions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Optimal deconvolution of transcriptional profiling data using quadratic programming with application to complex clinical blood samples

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

CD40 pathway activation status predicts response to CD40 therapy in diffuse large B cell lymphoma

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Hallmarks of Cancer: The Next Generation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Gene enrichment profiles reveal T-cell development, differentiation, and lineage-specific transcription factors including ZBTB25 as a novel NF-AT repressor

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

A global map of human gene expression

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Cell type-specific gene expression differences in complex tissues

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Deconvolution of blood microarray data identifies cellular activation patterns in systemic lupus erythematosus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

A HaemAtlas: characterizing gene expression in differentiated human blood cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Gene expression signature of cigarette smoking and its role in lung adenocarcinoma development and survival

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Selection of DDX5 as a novel internal control for Q-RT-PCR from microarray data using a block bootstrap re-sampling scheme

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Immune response in silico (IRIS): immune-specific genes identified from a compendium of microarray expression data.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Statistical significance for genomewide studies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Population-specific expression analysis (PSEA) reveals molecular changes in diseased brain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Practical selection of SVM parameters and noise estimation for SVM regression

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

New support vector algorithms

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4739640

Gene expression deconvolution in linear space

21 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25822800

12 December 2020

inferred from PubMed ID database lookup

Multicollinearity in Regression Analysis: The Problem Revisited

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3337

7 January 2021

inferred from DOI database lookup

Ridge Regression: Biased Estimation for Nonorthogonal Problems

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3337

7 January 2021

inferred from DOI database lookup

The Elements of Statistical Learning

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3337

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NMETH.3337

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25822800%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

1 reference