(Q36542678)

14 August 2017

An optimal Mg(2+) concentration for kinetic folding of the tetrahymena ribozyme (English)

1 reference

14 August 2017

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M S Rook

1

1 reference

14 August 2017

D K Treiber

series ordinal

2

1 reference

14 August 2017

J R Williamson

series ordinal

3

1 reference

14 August 2017

language of work or name

English

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publication date

1 October 1999

1 reference

Proceedings of the National Academy of Sciences of the United States of America

14 August 2017

1 reference

14 August 2017

96

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14 August 2017

22

1 reference

14 August 2017

12471-12476

1 reference

Magnesium-dependent folding of self-splicing RNA: exploring the link between cooperativity, thermodynamics, and kinetics

14 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

A preorganized active site in the crystal structure of the Tetrahymena ribozyme

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Stopped-flow fluorescence spectroscopy of a group II intron ribozyme reveals that domain 1 is an independent folding unit with a requirement for specific Mg2+ ions in the tertiary structure

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Kinetic pathway for folding of the Tetrahymena ribozyme revealed by three UV-inducible crosslinks

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Slow folding kinetics of RNase P RNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Assembly of a ribonucleoprotein catalyst by tertiary structure capture

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

GAAA tetraloop and conserved bulge stabilize tertiary structure of a group I intron domain

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Two major tertiary folding transitions of the Tetrahymena catalytic RNA.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Visualizing the higher order folding of a catalytic RNA molecule

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Effects of Mg2+, K+, and H+ on an equilibrium between alternative conformations of an RNA pseudoknot.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Conformational changes of transfer RNA. The role of magnesium(II)

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Time-resolved synchrotron X-ray "footprinting", a new approach to the study of nucleic acid structure and function: application to protein-DNA interactions and RNA folding.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Stabilization of RNA structure by Mg ions. Specific and non-specific effects.

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Cooperative binding of magnesium to transfer ribonucleic acid studied by a fluorescent probe

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

A common ancestor for oxygenic and anoxygenic photosynthetic systems: a comparison based on the structural model of photosystem I.

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.96.22.12471

RNA Folding at Millisecond Intervals by Synchrotron Hydroxyl Radical Footprinting

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.96.22.12471

Control of memory formation through regulated expression of a CaMKII transgene

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.96.22.12471

Folding intermediates of a self-splicing RNA: mispairing of the catalytic core

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Folding of RNA involves parallel pathways

4 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=22953

Conformational changes of transfer ribonucleic acid. Equilibrium phase diagrams

4 December 2018

1 reference

12 December 2020

Fast folding mutants of the Tetrahymena group I ribozyme reveal a rugged folding energy landscape

1 reference

12 December 2020

Kinetic intermediates in RNA folding

1 reference

12 December 2020

The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding

1 reference

12 December 2020

New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme

1 reference

12 December 2020

A magnesium ion core at the heart of a ribozyme domain

1 reference

12 December 2020

Intermediates and kinetic traps in the folding of a large ribozyme revealed by circular dichroism and UV absorbance spectroscopies and catalytic activity

1 reference

12 December 2020

Kinetic intermediates trapped by native interactions in RNA folding

1 reference

12 December 2020

Pathway modulation, circular permutation and rapid RNA folding under kinetic control

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.96.22.12471

1 reference

14 August 2017

0 references

1 reference

14 August 2017

1 reference