(Q36592434)

15 August 2017

The Physarum polycephalum Genome Reveals Extensive Use of Prokaryotic Two-Component and Metazoan-Type Tyrosine Kinase Signaling (English)

1 reference

15 August 2017

Physarum polycephalum

1 reference

12

Lucinda Fulton

0 references

Kenneth B. Storey

27

Kenneth B Storey

1 reference

15 August 2017

Reema Singh

25

0 references

Nicolas E. Buchler

Nicolas E Buchler

8

0 references

Pauline Schaap

Pauline Schaap

1

0 references

Ernst R Werner

Ernst R Werner

32

0 references

Pat Minx

3

Pat Minx

1 reference

15 August 2017

11

Catrina Fronick

1 reference

15 August 2017

31

Wesley C Warren

1 reference

15 August 2017

16

Laura F Landweber

1 reference

15 August 2017

Israel Barrantes

2

1 reference

15 August 2017

Narie Sasaki

4

1 reference

15 August 2017

Roger W Anderson

5

1 reference

15 August 2017

Marianne Bénard

6

1 reference

15 August 2017

Kyle K Biggar

7

1 reference

15 August 2017

Ralf Bundschuh

9

1 reference

15 August 2017

Xiao Chen

10

1 reference

15 August 2017

Georg Golderer

13

1 reference

15 August 2017

Niels Jahn

14

1 reference

15 August 2017

Volker Knoop

15

1 reference

15 August 2017

Chrystelle Maric

17

1 reference

15 August 2017

Dennis Miller

18

1 reference

15 August 2017

Angelika A Noegel

19

1 reference

15 August 2017

Rob Peace

20

1 reference

15 August 2017

Gérard Pierron

21

1 reference

15 August 2017

Taeko Sasaki

22

1 reference

15 August 2017

Mareike Schallenberg-Rüdinger

23

1 reference

15 August 2017

Michael Schleicher

24

1 reference

15 August 2017

Thomas Spaller

26

1 reference

15 August 2017

Takamasa Suzuki

28

1 reference

15 August 2017

Chad Tomlinson

29

1 reference

15 August 2017

John J Tyson

30

1 reference

15 August 2017

Gabriele Werner-Felmayer

33

1 reference

15 August 2017

Richard K Wilson

34

1 reference

15 August 2017

Thomas Winckler

35

1 reference

15 August 2017

Jonatha M Gott

36

1 reference

15 August 2017

Gernot Glöckner

37

1 reference

15 August 2017

Wolfgang Marwan

38

1 reference

15 August 2017

27 November 2015

1 reference

Genome Biology and Evolution

15 August 2017

1 reference

15 August 2017

8

1 reference

15 August 2017

1

1 reference

15 August 2017

109-125

1 reference

CDD: NCBI's conserved domain database

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Cell signaling during development of Dictyostelium

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The genome of the foraminiferan Reticulomyxa filosa

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A survey of PPR proteins identifies DYW domains like those of land plant RNA editing factors in diverse eukaryotes.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Cell cycle control across the eukaryotic kingdom

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The Revised Classification of Eukaryotes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A combinatorial amino acid code for RNA recognition by pentatricopeptide repeat proteins.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Evolution of SH2 domains and phosphotyrosine signalling networks

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Evolution of networks and sequences in eukaryotic cell cycle control

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Complete characterization of the edited transcriptome of the mitochondrion of Physarum polycephalum using deep sequencing of RNA.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Evolutionary crossroads in developmental biology: Dictyostelium discoideum

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Search and clustering orders of magnitude faster than BLAST

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Rules for biologically inspired adaptive network design

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Functional evolution of cyclin-dependent kinases.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Pentatricopeptide repeat proteins: a socket set for organelle gene expression.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The actinome of Dictyostelium discoideum in comparison to actins and actin-related proteins from other organisms.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A first glimpse at the transcriptome of Physarum polycephalum.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Genome sequencing in microfabricated high-density picolitre reactors

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The genome of the social amoeba Dictyostelium discoideum

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Evolutionary origin of cAMP-based chemoattraction in the social amoebae

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Hierarchical scaffolding with Bambus

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Genomic analysis of the eukaryotic protein kinase superfamily: a perspective

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Histidine protein kinases: key signal transducers outside the animal kingdom

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

BLAT—The BLAST-Like Alignment Tool

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A receptor tyrosine kinase from choanoflagellates: molecular insights into early animal evolution

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

InterProScan--an integration platform for the signature-recognition methods in InterPro

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Nitric oxide synthase is induced in sporulation of Physarum polycephalum

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The PPR motif - a TPR-related motif prevalent in plant organellar proteins

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The crystal structure of the Physarum polycephalum actin-fragmin kinase: an atypical protein kinase with a specialized substrate-binding domain

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A novel type of protein kinase phosphorylates actin in the actin-fragmin complex

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Universal control mechanism regulating onset of M-phase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Variable pathways for developmental changes of mitosis and cytokinesis in Physarum polycephalum

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Physarum actin is phosphorylated as the actin-fragmin complex at residues Thr203 and Thr202 by a specific 80 kDa kinase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Plant-type mitochondrial RNA editing in the protist Naegleria gruberi

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

AUGUSTUS: a web server for gene finding in eukaryotes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Patterns of inheritance, development and the mitotic cycle in the protist Physarum polycephalum

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Synchronization of mitosis by the fusion of the plasmodia of Physarum polycephalum

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The Acanthamoeba shikimate pathway has a unique molecular arrangement and is essential for aromatic amino acid biosynthesis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Two Dictyostelium tyrosine kinase-like kinases function in parallel, stress-induced STAT activation pathways.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The cyclic AMP phosphodiesterase RegA critically regulates encystation in social and pathogenic amoebas

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Phosphotyrosine Signaling: Evolving a New Cellular Communication System

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Physarum nitric oxide synthases: genomic structures and enzymology of recombinant proteins

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

The complete DNA sequence of the mitochondrial genome of Physarum polycephalum

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

A cAMP-phosphodiesterase controls PKA-dependent differentiation

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Cell cycle variation in cyclic adenosine 3',5'-monophosphate-dependent inhibition of protein kinase from Physarum polycephalum.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

RNA editing by cytidine insertion in mitochondria of Physarum polycephalum

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Genomic survey of premetazoans shows deep conservation of cytoplasmic tyrosine kinases and multiple radiations of receptor tyrosine kinases.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

DNA packaging proteins Glom and Glom2 coordinately organize the mitochondrial nucleoid of Physarum polycephalum

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

DYW-type PPR proteins in a heterolobosean protist: plant RNA editing factors involved in an ancient horizontal gene transfer?

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Robot control with biological cells.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Use of the giant multinucleate plasmodium of Physarum polycephalum to study RNA interference in the myxomycete.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Nobel Lecture. Cyclin dependent kinases and cell cycle control

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Spectroscopic detection of a phytochrome-like photoreceptor in the myxomycete Physarum polycephalum and the kinetic mechanism for the photocontrol of sporulation by Pfr.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Functional mapping of the branched signal transduction pathway that controls sporulation in Physarum polycephalum

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4758236

Protist phylogeny and the high-level classification of Protozoa

20 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FGBE%2FEVV237

Unipolar membrane association of Dishevelled mediates Frizzled planar cell polarity signaling

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FGBE%2FEVV237

Involvement of the second messenger cAMP in gravity-signal transduction in Physarum

21 January 2018

1 reference

12 December 2020

THE CONTROL OF PROTOPLASMIC STREAMING

1 reference

12 December 2020

Severin is a gelsolin prototype

1 reference

12 December 2020

Light is required for conidiation in Aspergillus nidulans

1 reference

12 December 2020

Dictyopterin, 6-(D-threo-1,2-dihydroxypropyl)-pterin, a new natural isomer of L-biopterin. Isolation from vegetative cells of Dictyostelium discoideum and identification

1 reference

12 December 2020

[Involvement of cyclic adenosine monophosphate in the control of motile behavior of Physarum polycephalum plasmodium]

1 reference

12 December 2020

Reverse transcriptase and intron number evolution

1 reference

12 December 2020

Initiation of synchronous mitosis in Physarum polycephalum. A model of the control of cell division in eukariots

1 reference

12 December 2020

Oscillatory contraction activity in Physarum

1 reference

12 December 2020

Mendelian analysis of the organization of actin sequences in Physarum polycephalum

1 reference

12 December 2020

Fragmin: a calcium ion sensitive regulatory factor on the formation of actin filaments

1 reference

12 December 2020

A photoreceptor with characteristics of phytochrome triggers sporulation in the true slime mould Physarum polycephalum

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVV237

1 reference

15 August 2017

1 reference

15 August 2017

PubMed publication ID

26615215

1 reference