(Q36595696)

15 August 2017

The atypical codon usage of the plant psbA gene may be the remnant of an ancestral bias (English)

1 reference

15 August 2017

1 reference

Morton BR

1

1 reference

15 August 2017

Levin JA

series ordinal

2

1 reference

15 August 2017

language of work or name

English

0 references

publication date

1 October 1997

1 reference

Proceedings of the National Academy of Sciences of the United States of America

15 August 2017

1 reference

15 August 2017

94

1 reference

15 August 2017

21

1 reference

15 August 2017

11434-11438

1 reference

Transcription and RNA stability are important determinants of higher plant chloroplast RNA levels.

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

A new method of inference of ancestral nucleotide and amino acid sequences

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Selection intensity for codon bias

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Neighboring base composition and transversion/transition bias in a comparison of rice and maize chloroplast noncoding regions

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Codon usage and tRNA content in unicellular and multicellular organisms

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

The codon Adaptation Index--a measure of directional synonymous codon usage bias, and its potential applications

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

The neighbor-joining method: a new method for reconstructing phylogenetic trees

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

An evolutionary perspective on synonymous codon usage in unicellular organisms

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Compositional constraints and genome evolution

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Selection on the codon bias of Chlamydomonas reinhardtii chloroplast genes and the plant psbA gene.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Identification of functional open reading frames in chloroplast genomes.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Rates of synonymous substitution do not indicate selective constraints on the codon use of the plant psbA gene.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Chloroplast DNA codon use: evidence for selection at the psb A locus based on tRNA availability

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Codon use and the rate of divergence of land plant chloroplast genes

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Neighboring base composition is strongly correlated with base substitution bias in a region of the chloroplast genome

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=23492

Classification and geography of the flowering plants

20 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.94.21.11434

Accuracies of ancestral amino acid sequences inferred by the parsimony, likelihood, and distance methods

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/9326627

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.94.21.11434

1 reference

15 August 2017

0 references

1 reference

15 August 2017

PubMed publication ID

9326627

1 reference