(Q36619971)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

RNA dimerization plays a role in ribosomal frameshifting of the SARS coronavirus (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

0 references

1 reference

1 reference

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Braden M. Roth

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Jonathan D. Dinman

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

9

Ralph S Baric

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

4

Boyd L Yount

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

author name string

Daniella Ishimaru

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Amy C Sims

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Nadukkudy V Eldho

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Gabriela C Pérez-Alvarado

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

David W Armbruster

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Deborah R Taylor

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

Mirko Hennig

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

language of work or name

English

0 references

publication date

28 December 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

volume

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

page(s)

2594-2608

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

21 February 2020

copyright license

start time

8 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3575852/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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Hepatitis C virus genomic RNA dimerization is mediated via a kissing complex intermediate

30 September 2017

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30 September 2017

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30 September 2017

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Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting

30 September 2017

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30 September 2017

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30 September 2017

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A review of studies on animal reservoirs of the SARS coronavirus

30 September 2017

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Correlation between mechanical strength of messenger RNA pseudoknots and ribosomal frameshifting

30 September 2017

1 reference

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Biochemical aspects of coronavirus replication and virus-host interaction.

30 September 2017

1 reference

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Comparative study of the effects of heptameric slippery site composition on -1 frameshifting among different eukaryotic systems.

30 September 2017

1 reference

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Severe acute respiratory syndrome coronavirus infection of human ciliated airway epithelia: role of ciliated cells in viral spread in the conducting airways of the lungs

30 September 2017

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An atypical RNA pseudoknot stimulator and an upstream attenuation signal for -1 ribosomal frameshifting of SARS coronavirus

30 September 2017

1 reference

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A three-stemmed mRNA pseudoknot in the SARS coronavirus frameshift signal

30 September 2017

1 reference

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Programmed ribosomal frameshifting in decoding the SARS-CoV genome

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Systematic analysis of bicistronic reporter assay data

30 September 2017

1 reference

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Identification and characterization of severe acute respiratory syndrome coronavirus replicase proteins

30 September 2017

1 reference

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Dimerization of retroviral RNA genomes: an inseparable pair.

30 September 2017

1 reference

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Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets

30 September 2017

1 reference

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Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus

30 September 2017

1 reference

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Isolation and characterization of viruses related to the SARS coronavirus from animals in southern China

30 September 2017

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Unique and conserved features of genome and proteome of SARS-coronavirus, an early split-off from the coronavirus group 2 lineage

30 September 2017

1 reference

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Mechanisms and enzymes involved in SARS coronavirus genome expression

30 September 2017

1 reference

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30 September 2017

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30 September 2017

1 reference

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Analysis of natural variants of the human immunodeficiency virus type 1 gag-pol frameshift stem-loop structure

30 September 2017

1 reference

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Bipartite signal for genomic RNA dimerization in Moloney murine leukemia virus

30 September 2017

1 reference

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Maintenance of the Gag/Gag-Pol ratio is important for human immunodeficiency virus type 1 RNA dimerization and viral infectivity

30 September 2017

1 reference

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Impact of human immunodeficiency virus type 1 RNA dimerization on viral infectivity and of stem-loop B on RNA dimerization and reverse transcription and dissociation of dimerization from packaging

30 September 2017

1 reference

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Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

30 September 2017

1 reference

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Dimerization of HIV-1 genomic RNA of subtypes A and B: RNA loop structure and magnesium binding

30 September 2017

1 reference

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Programmed translational frameshifting.

30 September 2017

1 reference

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Structure and function of the human immunodeficiency virus leader RNA.

30 September 2017

1 reference

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Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA.

30 September 2017

1 reference

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Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1.

30 September 2017

1 reference

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NMRPipe: a multidimensional spectral processing system based on UNIX pipes

30 September 2017

1 reference

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An 'elaborated' pseudoknot is required for high frequency frameshifting during translation of HCV 229E polymerase mRNA.

30 September 2017

1 reference

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Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro

30 September 2017

1 reference

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Solution Structure of the CUUG Hairpin Loop: A Novel RNA Tetraloop Motif

30 September 2017

1 reference

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Absorption mode two-dimensional NOE spectroscopy of exchangeable protons in oligonucleotides

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops"

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Genome of infectious bronchitis virus

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Dimerization of retroviral genomic RNAs: structural and functional implications

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Ecoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related Rhinolophus bat coronavirus in China reveal bats as a reservoir for acute, self-limiting infection that allows recombination events

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

A sequence required for -1 ribosomal frameshifting located four kilobases downstream of the frameshift site

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

HIV-1 genome dimerization: kissing-loop hairpin dictates whether nucleotides downstream of the 5' splice junction contribute to loose and tight dimerization of human immunodeficiency virus RNA.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

A long-distance RNA-RNA interaction plays an important role in programmed -1 ribosomal frameshifting in the translation of p88 replicase protein of Red clover necrotic mosaic virus

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Pattern of 4-thiouridine-induced cross-linking in 16S ribosomal RNA in the Escherichia coli 30S subunit

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Phylogeny of the SARS coronavirus.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

RNA LEGO: magnesium-dependent formation of specific RNA assemblies through kissing interactions

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Dimerization of a pathogenic human mitochondrial tRNA.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

A 19-nucleotide sequence upstream of the 5' major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3575852

Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23275571

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Variant effects of non-native kissing-loop hairpin palindromes on HIV replication and HIV RNA dimerization: role of stem-loop B in HIV replication and HIV RNA dimerization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23275571

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKS1361

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23275571%20AND%20SRC:MED&resulttype=core&format=json