(Q36640750)

15 August 2017

Ligand diffusion in the catalase from Proteus mirabilis: a molecular dynamics study (English)

1 reference

15 August 2017

Proteus mirabilis

1 reference

2

1 reference

15 August 2017

P Amara

1

1 reference

15 August 2017

H M Jouve

series ordinal

3

1 reference

15 August 2017

M J Field

series ordinal

4

1 reference

15 August 2017

1 October 2001

1 reference

15 August 2017

1 reference

15 August 2017

10

1 reference

15 August 2017

10

1 reference

15 August 2017

1927-1935

1 reference

How do substrates enter and products exit the buried active site of cytochrome P450cam? 1. Random expulsion molecular dynamics investigation of ligand access channels and mechanisms.

15 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Role of the lateral channel in catalase HPII of Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Structural dynamics of ligand diffusion in the protein matrix: A study on a new myoglobin mutant Y(B10) Q(E7) R(E10)

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Structure of catalase-A from Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

NMR identification of hydrophobic cavities with low water occupancies in protein structures using small gas molecules

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Prediction of pH-dependent properties of proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Intramolecular cavities in globular proteins

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Crystal structure of Proteus mirabilis PR catalase with and without bound NADPH

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Computational studies of the interaction of myoglobin and xenon

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Gas access to the active site of Ni-Fe hydrogenases probed by X-ray crystallography and molecular dynamics.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

How do substrates enter and products exit the buried active site of cytochrome P450cam? 2. Steered molecular dynamics and adiabatic mapping of substrate pathways.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Molecular dynamics of mouse acetylcholinesterase complexed with huperzine A.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Structure of catalase HPII from Escherichia coli at 1.9 A resolution.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Accessibility to internal cavities and ligand binding sites monitored by protein crystallographic thermal factors.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

Protein-ligand dynamics. A 96 picosecond simulation of a myoglobin-xenon complex.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2374231

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

20 September 2018

1 reference

Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison

21 January 2018

1 reference

THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method

21 January 2018

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

21 January 2018

1 reference

Structural dynamics of myoglobin

21 January 2018

1 reference

Molecular dynamics simulations of P450 BM3--examination of substrate-induced conformational change

21 January 2018

1 reference

12 December 2020

The active center of catalase

1 reference

12 December 2020

Dynamics of ligand binding to heme proteins

1 reference

12 December 2020

Purification and properties of the Proteus mirabilis catalase

1 reference

12 December 2020

Site‐directed mutagenesis of the lower parts of the major substrate channel of yeast catalase A leads to highly increased peroxidatic activity

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.14201

1 reference

15 August 2017

1 reference

15 August 2017

PubMed publication ID

11567083

1 reference