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Rules that govern UPF1 binding to mRNA 3' UTRs
scientific article published on 12 February 2013
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
title
Rules that govern UPF1 binding to mRNA 3' UTRs
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
author
Lynne E. Maquat
series ordinal
2
object named as
Lynne E Maquat
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
author name string
Tatsuaki Kurosaki
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
language of work or name
English
0 references
publication date
12 February 2013
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
published in
Proceedings of the National Academy of Sciences of the United States of America
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
volume
110
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
issue
9
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
page(s)
3357-3362
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
cites work
Temporal and spatial characterization of nonsense-mediated mRNA decay
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Evidence that the Upf1-related molecular motor scans the 3'-UTR to ensure mRNA integrity
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Testing the faux-UTR model for NMD: analysis of Upf1p and Pab1p competition for binding to eRF3/Sup35p.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
N- and C-terminal Upf1 phosphorylations create binding platforms for SMG-6 and SMG-5:SMG-7 during NMD
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Upf1 ATPase-dependent mRNP disassembly is required for completion of nonsense- mediated mRNA decay
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Upf1 senses 3'UTR length to potentiate mRNA decay
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Characterization of SMG-9, an essential component of the nonsense-mediated mRNA decay SMG1C complex
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
NMD: RNA biology meets human genetic medicine
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30 September 2017
The pioneer round of translation: features and functions
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30 September 2017
Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors
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PubMed Central
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30 September 2017
Remodeling of the pioneer translation initiation complex involves translation and the karyopherin importin beta
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30 September 2017
Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors
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30 September 2017
SMG-8 and SMG-9, two novel subunits of the SMG-1 complex, regulate remodeling of the mRNA surveillance complex during nonsense-mediated mRNA decay
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PubMed Central
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30 September 2017
Disassembly of exon junction complexes by PYM
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PubMed Central
reference URL
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30 September 2017
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
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PubMed Central
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30 September 2017
Introducing sense into nonsense in treatments of human genetic diseases
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30 September 2017
A competition between stimulators and antagonists of Upf complex recruitment governs human nonsense-mediated mRNA decay
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Failsafe nonsense-mediated mRNA decay does not detectably target eIF4E-bound mRNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Nonsense-mediated mRNA decay modulates clinical outcome of genetic disease
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PubMed Central
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30 September 2017
Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay
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PubMed Central
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30 September 2017
SMG7 is a 14-3-3-like adaptor in the nonsense-mediated mRNA decay pathway
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7
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PubMed Central
reference URL
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30 September 2017
Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities
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PubMed Central
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30 September 2017
Characterization of human Smg5/7a: a protein with similarities to Caenorhabditis elegans SMG5 and SMG7 that functions in the dephosphorylation of Upf1.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Human Upf proteins target an mRNA for nonsense-mediated decay when bound downstream of a termination codon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
Nonsense-mediated mRNA decay in health and disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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30 September 2017
Intron function in the nonsense-mediated decay of beta-globin mRNA: indications that pre-mRNA splicing in the nucleus can influence mRNA translation in the cytoplasm
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
The surveillance complex interacts with the translation release factors to enhance termination and degrade aberrant mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
30 September 2017
UPF1 association with the cap-binding protein, CBP80, promotes nonsense-mediated mRNA decay at two distinct steps
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
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28 June 2018
Binary specification of nonsense codons by splicing and cytoplasmic translation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3587222
retrieved
28 June 2018
The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23404710
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Upstream introns influence the efficiency of final intron removal and RNA 3'-end formation
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23404710
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1073/PNAS.1219908110
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
ADS bibcode
2013PNAS..110.3357K
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Fatcat ID
release_j75lgzwwpnf4jnjvy26hnstp4u
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https://api.fatcat.wiki/v0/release/j75lgzwwpnf4jnjvy26hnstp4u
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24 November 2022
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mapped directly with Wikidata item
PMCID
3587222
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
PubMed ID
23404710
1 reference
stated in
Europe PubMed Central
PMCID
3587222
retrieved
15 August 2017
ResearchGate publication ID
235604937
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