(Q36673297)

English

Structural and functional constraints limit options for cytotoxic T-lymphocyte escape in the immunodominant HLA-B27-restricted epitope in human immunodeficiency virus type 1 capsid

scientific article published on 2 April 2008

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

Structural and functional constraints limit options for cytotoxic T-lymphocyte escape in the immunodominant HLA-B27-restricted epitope in human immunodeficiency virus type 1 capsid (English)

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Europe PubMed Central

PMC publication ID

15 August 2017

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Mark A. Brockman

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15 August 2017

Christian Brander

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Christian Brander

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Alessandro Sette

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Alessandro Sette

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15 August 2017

Bruce D. Walker

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Bruce D Walker

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15 August 2017

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Xu G Yu

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15 August 2017

Alicja Piechocka-Trocha

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Alicja Trocha

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15 August 2017

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Todd M Allen

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John Sidney

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15 August 2017

Rachel L Allgaier

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Rachel L Allgaier

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15 August 2017

Arne Schneidewind

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Arne Schneidewind

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15 August 2017

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Yaoyu E Wang

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15 August 2017

Todd J Suscovich

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Todd J Suscovich

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15 August 2017

Bianca R. Mothe

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Bianca R Mothé

1 reference

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15 August 2017

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Thomas Kuntzen

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15 August 2017

Cesar Oniangue-Ndza

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Cesar Oniangue-Ndza

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15 August 2017

author name string

Huabiao Chen

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15 August 2017

Bin Li

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15 August 2017

Rahma I Adam

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15 August 2017

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publication date

2 April 2008

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Europe PubMed Central

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15 August 2017

Journal of Virology

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15 August 2017

82

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Europe PubMed Central

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15 August 2017

11

1 reference

Europe PubMed Central

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15 August 2017

5594-5605

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

A viral CTL escape mutation leading to immunoglobulin-like transcript 4-mediated functional inhibition of myelomonocytic cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Superior control of HIV-1 replication by CD8+ T cells is reflected by their avidity, polyfunctionality, and clonal turnover

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Escape from the dominant HLA-B27-restricted cytotoxic T-lymphocyte response in Gag is associated with a dramatic reduction in human immunodeficiency virus type 1 replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Escape and compensation from early HLA-B57-mediated cytotoxic T-lymphocyte pressure on human immunodeficiency virus type 1 Gag alter capsid interactions with cyclophilin A.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Recognition of a defined region within p24 gag by CD8+ T cells during primary human immunodeficiency virus type 1 infection in individuals expressing protective HLA class I alleles

1 reference

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30 September 2017

HLA Alleles Associated with Delayed Progression to AIDS Contribute Strongly to the Initial CD8(+) T Cell Response against HIV-1.

1 reference

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30 September 2017

Rapid reversion of sequence polymorphisms dominates early human immunodeficiency virus type 1 evolution

1 reference

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30 September 2017

The high-frequency major histocompatibility complex class I allele Mamu-B*17 is associated with control of simian immunodeficiency virus SIVmac239 replication

1 reference

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30 September 2017

Altered HIV-1 Gag protein interactions with cyclophilin A (CypA) on the acquisition of H219Q and H219P substitutions in the CypA binding loop

1 reference

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30 September 2017

Use of a novel GFP reporter cell line to examine replication capacity of CXCR4- and CCR5-tropic HIV-1 by flow cytometry

1 reference

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30 September 2017

Unique acquisition of cytotoxic T-lymphocyte escape mutants in infant human immunodeficiency virus type 1 infection

1 reference

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30 September 2017

Classification of A1- and A24-supertype molecules by analysis of their MHC-peptide binding repertoires

1 reference

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30 September 2017

Characterization of functional and phenotypic changes in anti-Gag vaccine-induced T cell responses and their role in protection after HIV-1 infection

1 reference

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30 September 2017

Immune escape precedes breakthrough human immunodeficiency virus type 1 viremia and broadening of the cytotoxic T-lymphocyte response in an HLA-B27-positive long-term-nonprogressing child

1 reference

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30 September 2017

DNA deamination mediates innate immunity to retroviral infection

1 reference

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30 September 2017

Expression of the major histocompatibility complex class I molecule Mamu-A*01 is associated with control of simian immunodeficiency virus SIVmac239 replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Favorable and unfavorable HLA class I alleles and haplotypes in Zambians predominantly infected with clade C human immunodeficiency virus type 1

1 reference

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30 September 2017

Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication

1 reference

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30 September 2017

Human immunodeficiency virus type 1 DNA sequences genetically damaged by hypermutation are often abundant in patient peripheral blood mononuclear cells and may be generated during near-simultaneous infection and activation of CD4(+) T cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Clustered mutations in HIV-1 gag are consistently required for escape from HLA-B27-restricted cytotoxic T lymphocyte responses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2395179

30 September 2017

Neural network method for predicting peptides that bind major histocompatibility complex molecules

1 reference

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30 September 2017

HLA B*5701 is highly associated with restriction of virus replication in a subgroup of HIV-infected long term nonprogressors

1 reference

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30 September 2017

Dramatic rise in plasma viremia after CD8(+) T cell depletion in simian immunodeficiency virus-infected macaques.

1 reference

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30 September 2017

Control of viremia in simian immunodeficiency virus infection by CD8+ lymphocytes

1 reference

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30 September 2017

Administration of an anti-CD8 monoclonal antibody interferes with the clearance of chimeric simian/human immunodeficiency virus during primary infections of rhesus macaques

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30 September 2017

Genetic drift can dominate short-term human immunodeficiency virus type 1 nef quasispecies evolution in vivo

1 reference

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30 September 2017

Initial appearance of the 184Ile variant in lamivudine-treated patients is caused by the mutational bias of human immunodeficiency virus type 1 reverse transcriptase

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30 September 2017

Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid

1 reference

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Novel, cross-restricted, conserved, and immunodominant cytotoxic T lymphocyte epitopes in slow progressors in HIV type 1 infection

1 reference

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Cyclophilin A is required for the replication of group M human immunodeficiency virus type 1 (HIV-1) and simian immunodeficiency virus SIV(CPZ)GAB but not group O HIV-1 or other primate immunodeficiency viruses

1 reference

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Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome

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The unusual nucleotide content of the HIV RNA genome results in a biased amino acid composition of HIV proteins

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Immunopathogenic events in acute infection of rhesus monkeys with simian immunodeficiency virus of macaques

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Virus-specific CD8+ cytotoxic T-lymphocyte activity associated with control of viremia in primary human immunodeficiency virus type 1 infection

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Sequence constraints and recognition by CTL of an HLA-B27-restricted HIV-1 gag epitope

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G-->A hypermutation of the human immunodeficiency virus type 1 genome: evidence for dCTP pool imbalance during reverse transcription

1 reference

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Relationship between the inhibition constant (K1) and the concentration of inhibitor which causes 50 per cent inhibition (I50) of an enzymatic reaction

1 reference

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Long-term culture and fine specificity of human cytotoxic T-lymphocyte clones reactive with human immunodeficiency virus type 1.

1 reference

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The relationship between class I binding affinity and immunogenicity of potential cytotoxic T cell epitopes

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HIV-1 isolates are rapidly evolving quasispecies: evidence for viral mixtures and preferred nucleotide substitutions

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Structural homologies between two HLA B27-restricted peptides suggest residues important for interaction with HLA B27.

1 reference

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Mutation pattern of human immunodeficiency virus gene

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Random T-cell receptor recruitment in human immunodeficiency virus type 1 (HIV-1)-specific CD8+ T cells from genetically identical twins infected with the same HIV-1 strain

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Evolution of HIV-1 in an HLA-B*57-positive patient during virologic escape.

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A new variant cytotoxic T lymphocyte escape mutation in HLA-B27-positive individuals infected with HIV type 1.

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Cyclophilin A modulates the sensitivity of HIV-1 to host restriction factors

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HIV-1 superinfection despite broad CD8+ T-cell responses containing replication of the primary virus

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HIV-1 gag-specific cytotoxic T lymphocytes defined with recombinant vaccinia virus and synthetic peptides

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CTL escape and increased viremia irrespective of HIV-specific CD4+ T-helper responses in two HIV-infected individuals

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Eventual AIDS vaccine failure in a rhesus monkey by viral escape from cytotoxic T lymphocytes

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Evolution and transmission of stable CTL escape mutations in HIV infection

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The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC

1 reference

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12 December 2020

based on heuristic

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Transfer of HIV-1-specific cytotoxic T lymphocytes to an AIDS patient leads to selection for mutant HIV variants and subsequent disease progression

1 reference

https://pubmed.ncbi.nlm.nih.gov/18385228

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS

1 reference

https://pubmed.ncbi.nlm.nih.gov/18385228

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AIDS restriction HLA allotypes target distinct intervals of HIV-1 pathogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18385228

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inferred from PubMed ID database lookup

HLA and AIDS: a cautionary tale

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Investigation of N-terminal domain charged residues on the assembly and stability of HIV-1 CA

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https://pubmed.ncbi.nlm.nih.gov/18385228

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based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.02356-07

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

15 August 2017

ResearchGate publication ID

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