(Q36676658)

15 August 2017

The yeast genome undergoes significant topological reorganization in quiescence (English)

1 reference

15 August 2017

James R Broach

5

0 references

author name string

Mark T Rutledge

1

1 reference

15 August 2017

Mariano Russo

2

1 reference

15 August 2017

Jon-Matthew Belton

3

1 reference

15 August 2017

Job Dekker

4

1 reference

15 August 2017

language of work or name

English

0 references

publication date

21 July 2015

1 reference

15 August 2017

Nucleic Acids Research

1 reference

15 August 2017

43

1 reference

15 August 2017

17

1 reference

15 August 2017

8299-8313

1 reference

Creative Commons Attribution 4.0 International

15 August 2017

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4787801

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4787801/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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Cohesin-dependent globules and heterochromatin shape 3D genome architecture in S. pombe

30 September 2017

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An array of nuclear microtubules reorganizes the budding yeast nucleus during quiescence

30 September 2017

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30 September 2017

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Genome architecture: domain organization of interphase chromosomes

30 September 2017

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30 September 2017

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30 September 2017

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Iterative correction of Hi-C data reveals hallmarks of chromosome organization

30 September 2017

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30 September 2017

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Topological domains in mammalian genomes identified by analysis of chromatin interactions

30 September 2017

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Chromatin organization - the 30 nm fiber

30 September 2017

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30 September 2017

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Yeast cells can access distinct quiescent states

30 September 2017

1 reference

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Functional nuclear architecture studied by microscopy: present and future

30 September 2017

1 reference

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Metadata matters: access to image data in the real world

30 September 2017

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A three-dimensional model of the yeast genome

30 September 2017

1 reference

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TOR-dependent reduction in the expression level of Rrn3p lowers the activity of the yeast RNA Pol I machinery, but does not account for the strong inhibition of rRNA production

30 September 2017

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Chromosome arm length and nuclear constraints determine the dynamic relationship of yeast subtelomeres

30 September 2017

1 reference

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Cohesinopathy mutations disrupt the subnuclear organization of chromatin

30 September 2017

1 reference

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Comprehensive mapping of long-range interactions reveals folding principles of the human genome

30 September 2017

1 reference

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Centromere replication timing determines different forms of genomic instability in Saccharomyces cerevisiae checkpoint mutants during replication stress

30 September 2017

1 reference

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Yeast silent mating type loci form heterochromatic clusters through silencer protein-dependent long-range interactions

30 September 2017

1 reference

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Slow growth induces heat-shock resistance in normal and respiratory-deficient yeast

30 September 2017

1 reference

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Actively transcribed rRNA genes in S. cerevisiae are organized in a specialized chromatin associated with the high-mobility group protein Hmo1 and are largely devoid of histone molecules.

30 September 2017

1 reference

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Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Replication in hydroxyurea: it's a matter of time

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Nutrient starvation promotes condensin loading to maintain rDNA stability

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Isolation of quiescent and nonquiescent cells from yeast stationary-phase cultures

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

DNA polymerases alpha, delta, and epsilon localize and function together at replication forks in Saccharomyces cerevisiae.

30 September 2017

1 reference

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Chromosome looping in yeast: telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization

30 September 2017

1 reference

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Silencing near tRNA genes requires nucleolar localization.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

"Sleeping beauty": quiescence in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

RPD3 is required for the inactivation of yeast ribosomal DNA genes in stationary phase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

The DNA polymerase domain of pol(epsilon) is required for rapid, efficient, and highly accurate chromosomal DNA replication, telomere length maintenance, and normal cell senescence in Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Directional bias during mating type switching in Saccharomyces is independent of chromosomal architecture

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Capturing chromosome conformation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Centromere position in budding yeast: evidence for anaphase A.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

The clustering of telomeres and colocalization with Rap1, Sir3, and Sir4 proteins in wild-type Saccharomyces cerevisiae

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Organization of DNA into foci during replication

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

SIR3 and SIR4 proteins are required for the positioning and integrity of yeast telomeres

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Comparison of the structure and transcriptional capability of growing phase and stationary yeast chromatin: a model for reversible gene activation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Folded chromosomes in non-cycling yeast cells: evidence for a characteristic g0 form

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Live-cell imaging reveals replication of individual replicons in eukaryotic replication factories

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Yeast nuclei display prominent centromere clustering that is reduced in nondividing cells and in meiotic prophase

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Establishment and maintenance of alternative chromatin states at a multicopy gene locus.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Nucleolar clustering of dispersed tRNA genes.

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

Chromosome dynamics in the yeast interphase nucleus

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4787801

ORC-dependent and origin-specific initiation of DNA replication at defined foci in isolated yeast nuclei

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26202961

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKV723

1 reference

release_rgpt24puavdfnbn2uhmj5onqtq

15 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/rgpt24puavdfnbn2uhmj5onqtq

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

15 August 2017

PubMed publication ID

26202961

1 reference