(Q36700369)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

title

16Stimator: statistical estimation of ribosomal gene copy numbers from draft genome assemblies (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

author name string

Matthew Perisin

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

Jack A Gilbert

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

Joy Bergelson

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

language of work or name

1 reference

11 September 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

page(s)

1020-1024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

CNOGpro: detection and quantification of CNVs in prokaryotic whole-genome sequencing data

23 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Extensive strain-level copy-number variation across human gut microbiome species

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Insights into structural variations and genome rearrangements in prokaryotic genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Computational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectives

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Characterizing and measuring bias in sequence data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

rrnDB: documenting the number of rRNA and tRNA genes in bacteria and archaea

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

The RAST Server: rapid annotations using subsystems technology

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Sensitive and accurate detection of copy number variants using read depth of coverage

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

Real-time PCR determination of rRNA gene copy number: absolute and relative quantification assays with Escherichia coli.

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4796925

5 September 2018

Identifiers

DOI

10.1038/ISMEJ.2015.161

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

release_ayirrj6akrhbdmnpqgyxkqxnuq

23 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ayirrj6akrhbdmnpqgyxkqxnuq

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json

23 February 2020

PubMed publication ID

26359911

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26359911%20AND%20SRC:MED&resulttype=core&format=json