(Q36700432)

15 August 2017

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title

Environmental controls on denitrifying communities and denitrification rates: insights from molecular methods (English)

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15 August 2017

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2

David D Myrold

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15 August 2017

3

Mary Firestone

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15 August 2017

4

Mary Voytek

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15 August 2017

author name string

Matthew D Wallenstein

series ordinal

1

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15 August 2017

publication date

1 December 2006

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15 August 2017

published in

Ecological Applications

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15 August 2017

volume

16

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15 August 2017

issue

6

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15 August 2017

page(s)

2143-2152

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PCR bias in ecological analysis: a case study for quantitative Taq nuclease assays in analyses of microbial communities

15 August 2017

cites work

1 reference

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Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities

21 January 2018

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Reciprocal transfer effects on denitrifying community composition and activity at forest and meadow sites in the Cascade Mountains of Oregon

21 January 2018

1 reference

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Community structure of denitrifiers, bacteria, and archaea along redox gradients in Pacific Northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes

21 January 2018

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Nitric oxide reductase (norB) genes from pure cultures and environmental samples

21 January 2018

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Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in pacific northwest marine sediment communities

21 January 2018

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mRNA extraction and reverse transcription-PCR protocol for detection of nifH gene expression by Azotobacter vinelandii in soil

21 January 2018

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Genetic characterization of the nitrate reducing community based on narG nucleotide sequence analysis

21 January 2018

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Denitrifying bacteria in bulk and maize-rhizospheric soil: diversity and N2O-reducing abilities.

21 January 2018

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Pseudomonas stutzeri nitrite reductase gene abundance in environmental samples measured by real-time PCR

21 January 2018

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Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR.

21 January 2018

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Simultaneous recovery of RNA and DNA from soils and sediments

21 January 2018

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Purification, characterization, and genetic analysis of Cu-containing dissimilatory nitrite reductase from a denitrifying halophilic archaeon, Haloarcula marismortui

21 January 2018

1 reference

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Molecular diversity of denitrifying genes in continental margin sediments within the oxygen-deficient zone off the Pacific coast of Mexico

21 January 2018

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Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA

21 January 2018

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Denitrifying genes in bacterial and Archaeal genomes

21 January 2018

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Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Diversity of nitrite reductase (nirK and nirS) gene fragments in forested upland and wetland soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Community composition and functioning of denitrifying bacteria from adjacent meadow and forest soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Community composition and activities of denitrifying bacteria from adjacent agricultural soil, riparian soil, and creek sediment in Oregon, USA

21 January 2018

1 reference

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Environmental genomics, the big picture?

21 January 2018

1 reference

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Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorganisms

21 January 2018

1 reference

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Nitrous oxide reductase (nosZ) gene-specific PCR primers for detection of denitrifiers and three nosZ genes from marine sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Horizontal heterogeneity of denitrifying bacterial communities in marine sediments by terminal restriction fragment length polymorphism analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

RNA isolation from soil for bacterial community and functional analysis: evaluation of different extraction and soil conservation protocols

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Reassessing PCR primers targeting nirS, nirK and nosZ genes for community surveys of denitrifying bacteria with DGGE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Observation of high seasonal variation in community structure of denitrifying bacteria in arable soil receiving artificial fertilizer and cattle manure by determining T-RFLP of nir gene fragments

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Development and evaluation of functional gene arrays for detection of selected genes in the environment

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Purification and cDNA cloning of nitric oxide reductase cytochrome P450nor (CYP55A4) from Trichosporon cutaneum

21 January 2018

1 reference

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Microarrays for bacterial detection and microbial community analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

THE FUNCTIONAL SIGNIFICANCE OF DENITRIFIER COMMUNITY COMPOSITION IN A TERRESTRIAL ECOSYSTEM

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Role of denitrifier diversity in rates of nitrous oxide consumption in a terrestrial ecosystem

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

Diversity of denitrifying microflora and ability to reduce N 2 O in two soils

21 January 2018

1 reference

https://api.crossref.org/works/10.1890%2F1051-0761%282006%29016%5B2143%3AECODCA%5D2.0.CO%3B2

10.1890/1051-0761(2006)016[2143:ECODCA]2.0.CO;2

21 January 2018

Identifiers

DOI

1 reference

15 August 2017

1 reference