(Q36757930)

English

Complete genome sequences from three genetically distinct strains reveal high intraspecies genetic diversity in the microsporidian Encephalitozoon cuniculi

scientific article published on 4 January 2013

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Complete genome sequences from three genetically distinct strains reveal high intraspecies genetic diversity in the microsporidian Encephalitozoon cuniculi (English)

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

0 references

genetic diversity

1 reference

based on heuristic

inferred from title

Encephalitozoon cuniculi

object named as

Encephalitozoon cuniculi

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Christina A Cuomo

6

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Patrick John Keeling

8

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Jean-François Pombert

object named as

Jean-François Pombert

1

0 references

David Roy Smith

object named as

David R Smith

3

0 references

author name string

Jinshan Xu

2

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

David Heiman

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Sarah Young

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Louis M Weiss

7

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

publication date

4 January 2013

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Eukaryotic Cell

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

12

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

503-511

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Extremely reduced levels of heterozygosity in the vertebrate pathogen Encephalitozoon cuniculi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Evolutionary implications of horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

The malaria parasite Plasmodium vivax exhibits greater genetic diversity than Plasmodium falciparum

1 reference

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29 September 2017

Microsporidian genome analysis reveals evolutionary strategies for obligate intracellular growth.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics.

1 reference

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Diversity of Nosema associated with bumblebees (Bombus spp.) from China

1 reference

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KEGG for integration and interpretation of large-scale molecular data sets

1 reference

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Evidence for a high mutation rate at rapidly evolving yeast centromeres

1 reference

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A framework for variation discovery and genotyping using next-generation DNA sequencing data

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High-quality draft assemblies of mammalian genomes from massively parallel sequence data

1 reference

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AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species

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29 September 2017

Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies

1 reference

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29 September 2017

The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis

1 reference

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RDP3: a flexible and fast computer program for analyzing recombination

1 reference

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29 September 2017

Microsporidiosis: Enterocytozoon bieneusi in domesticated and wild animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Chromosomal G + C content evolution in yeasts: systematic interspecies differences, and GC-poor troughs at centromeres

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Evolution of the sex-related locus and genomic features shared in microsporidia and fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Parallelization of the MAFFT multiple sequence alignment program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

The human microsporidian Encephalitozoon hellem synthesizes two spore wall polymorphic proteins useful for epidemiological studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Host-specific segregation of ribosomal nucleotide sequence diversity in the microsporidian Enterocytozoon bieneusi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Generation of genetic diversity in microsporidia via sexual reproduction and horizontal gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

1 reference

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29 September 2017

SOAP2: an improved ultrafast tool for short read alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

SNP detection for massively parallel whole-genome resequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Enterocytozoon bieneusi genotype nomenclature based on the internal transcribed spacer sequence: a consensus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

ABySS: a parallel assembler for short read sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Horizontal gene transfer in eukaryotic evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

A novel route for ATP acquisition by the remnant mitochondria of Encephalitozoon cuniculi.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Minimus: a fast, lightweight genome assembler

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genome variation and evolution of the malaria parasite Plasmodium falciparum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Versatile and open software for comparing large genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Intraspecies genotype variability of the microsporidian parasite Encephalitozoon hellem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genotyping Encephalitozoon hellem isolates by analysis of the polar tube protein gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Artemis: sequence visualization and annotation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Microsporidiosis in mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Consed: a graphical tool for sequence finishing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

29 September 2017

Genomic diversity of the human intestinal parasite Entamoeba histolytica

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Comparative genome analysis of two Cryptosporidium parvum isolates with different host range.

1 reference

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28 June 2018

RATT: Rapid Annotation Transfer Tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

A new Encephalitozoon species (Microsporidia) isolated from the lubber grasshopper, Romalea microptera (Beauvois) (Orthoptera: Romaleidae).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Tablet--next generation sequence assembly visualization

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28 June 2018

Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Nosema cuiculi: in vitro isolation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Isolation and in vitro cultivation of the mammalian microsporidian Encephalitozoon cuniculi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Isolation of the causative organism of canine encephalitozoonosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

28 June 2018

Population genetic analysis of Enterocytozoon bieneusi in humans.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

5 September 2018

Polymorphism and recombination for rDNA in the putatively asexual microsporidian Nosema ceranae, a pathogen of honeybees.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

5 September 2018

Identification and characterization of three Encephalitozoon cuniculi strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

5 September 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3623445

5 September 2018

Polymorphism of the gene encoding a major polar tube protein PTP1 in two microsporidia of the genus Encephalitozoon

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/EC.00312-12

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

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