(Q36774924)

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New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors.

scientific article published on 29 March 2007

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scholarly article

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28 December 2019

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New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors (English)

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Europe PubMed Central

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28 December 2019

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28 December 2019

author name string

Ferenc Müller

1

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28 December 2019

Màté A Demény

2

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29 March 2007

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28 December 2019

Journal of Biological Chemistry

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28 December 2019

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28 December 2019

14685-14689

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28 December 2019

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28 December 2019

The general transcription factors of RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Lasker Basic Medical Research Award. The eukaryotic transcriptional machinery: complexities and mechanisms unforeseen.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The RNA polymerase II core promoter: a key component in the regulation of gene expression

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Promoter prediction analysis on the whole human genome.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Comprehensive analysis of transcriptional promoter structure and function in 1% of the human genome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Genome-wide analysis of mammalian promoter architecture and evolution

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Promoter features related to tissue specificity as measured by Shannon entropy

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Clustering of DNA sequences in human promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Mice and men: their promoter properties

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The Xenopus Brachyury promoter is activated by FGF and low concentrations of activin and suppressed by high concentrations of activin and by paired-type homeodomain proteins

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Identification of two nuclear factor-binding domains on the chicken cardiac actin promoter: implications for regulation of the gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Global role of TATA box-binding protein recruitment to promoters in mediating gene expression profiles

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Identification and distinct regulation of yeast TATA box-containing genes.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Perspectives on the RNA polymerase II core promoter.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The RNA polymerase II core promoter

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The new core promoter element XCPE1 (X Core Promoter Element 1) directs activator-, mediator-, and TATA-binding protein-dependent but TFIID-independent RNA polymerase II transcription from TATA-less promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Comprehensive analysis of the base composition around the transcription start site in Metazoa

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The multicoloured world of promoter recognition complexes.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TAF10 (TAF(II)30) is necessary for TFIID stability and early embryogenesis in mice.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Testis-specific TAF homologs collaborate to control a tissue-specific transcription program.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Developmental and cell type-specific regulation of core promoter transcription factors in germ cells of frogs and mice.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Mapping key functional sites within yeast TFIID

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Identification of a small TAF complex and its role in the assembly of TAF-containing complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

CIF150, a human cofactor for transcription factor IID-dependent initiator function

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Functional characterization of core promoter elements: the downstream core element is recognized by TAF1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Different functional domains of TAFII250 modulate expression of distinct subsets of mammalian genes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Core promoter binding by histone-like TAF complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TAF10 is required for the establishment of skin barrier function in foetal, but not in adult mouse epidermis.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

A high-resolution map of active promoters in the human genome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Association of human TFIID-promoter complexes with silenced mitotic chromatin in vivo

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Coactivator cross-talk specifies transcriptional output

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Robust mRNA transcription in chicken DT40 cells depleted of TAF(II)31 suggests both functional degeneracy and evolutionary divergence

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TAF9b (formerly TAF9L) is a bona fide TAF that has unique and overlapping roles with TAF9

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TFIID can be rate limiting in vivo for TATA-containing, but not TATA-lacking, RNA polymerase II promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TATA-binding protein (TBP)-like factor (TLF) is a functional regulator of transcription: reciprocal regulation of the neurofibromatosis type 1 and c-fos genes by TLF/TRF2 and TBP

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Core promoter elements and TAFs contribute to the diversity of transcriptional activation in vertebrates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

IFN-Stimulated transcription through a TBP-free acetyltransferase complex escapes viral shutoff

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Promoter-selective properties of the TBP-related factor TRF1.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TBP2, a vertebrate-specific member of the TBP family, is required in embryonic development of zebrafish.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Specialized and redundant roles of TBP and a vertebrate-specific TBP paralog in embryonic gene regulation in Xenopus

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TRF3, a TATA-box-binding protein-related factor, is vertebrate-specific and widely expressed

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The TBP-like factor: an alternative transcription factor in metazoa?

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Tagging mammalian transcription complexity

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Dynamic usage of transcription start sites within core promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

The transcriptional regulatory code of eukaryotic cells--insights from genome-wide analysis of chromatin organization and transcription factor binding

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

One, two, three--p53, p63, p73 and chemosensitivity.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Developmental change in TATA-box utilization during preimplantation mouse development.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Developmental specificity of recruitment of TBP to the TATA box of the human gamma-globin gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

TATA-dependent enhancer stimulation of promoter activity in mice is developmentally acquired

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Characterization and predictive discovery of evolutionarily conserved mammalian alternative promoters

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Definition of multiple, functionally distinct TATA elements, one of which is a target in the hsp70 promoter for E1A regulation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Functional heterogeneity of mammalian TATA-box sequences revealed by interaction with a cell-specific enhancer

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

A potential role for Elf-1 in terminal transferase gene regulation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Specific repression of TATA-mediated but not initiator-mediated transcription by wild-type p53.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Functional characterization of core promoter elements: DPE-specific transcription requires the protein kinase CK2 and the PC4 coactivator

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Identification of hTAF(II)80 delta links apoptotic signaling pathways to transcription factor TFIID function

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Regulation of Gene Expression by Multiple Forms of TFIID and Other Novel TAFII-Containing Complexes

1 reference

https://api.crossref.org/works/10.1074%2FJBC.R700012200

21 January 2018

Identifiers

10.1074/JBC.R700012200

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17395580%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17395580%20AND%20SRC:MED&resulttype=core&format=json

28 December 2019

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