(Q36790438)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

title

Interpretation of ensembles created by multiple iterative rebuilding of macromolecular models (English)

1 reference

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29 December 2019

1 reference

4

1 reference

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29 December 2019

Thomas C. Terwilliger

1

1 reference

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29 December 2019

Randy Read

7

1 reference

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29 December 2019

Dusan Turk

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

Li-Wei Hung

9

1 reference

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29 December 2019

3

Pavel V Afonine

1 reference

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29 December 2019

6

Peter Zwart

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

5

Nigel W Moriarty

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

Ralf W Grosse-Kunstleve

2

object named as

Ralf W Grosse-Kunstleve

1 reference

29 December 2019

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

publication date

21 April 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

Acta Crystallographica Section D: Biological Crystallography

29 December 2019

published in

1 reference

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29 December 2019

volume

63

1 reference

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29 December 2019

issue

Pt 5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

page(s)

597-610

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

Refinement and reliability of macromolecular models based on X-ray diffraction data.

29 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

SHELXL: high-resolution refinement

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Conformer generation under restraints

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

A robust bulk-solvent correction and anisotropic scaling procedure

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

The CCP4 suite: programs for protein crystallography

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Structure-activity relationships in purine-based inhibitor binding to HSP90 isoforms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Heterogeneity and inaccuracy in protein structures solved by X-ray crystallography.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Improving macromolecular atomic models at moderate resolution by automated iterative model building, statistical density modification and refinement

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Crystal Structure of Neisserial Surface Protein A (NspA), a Conserved Outer Membrane Protein with Vaccine Potential

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Automated main-chain model building by template matching and iterative fragment extension

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

PHENIX: building new software for automated crystallographic structure determination

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Conformational disorder of proteins assessed by real-space molecular dynamics refinement.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Maximum-likelihood density modification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Crystal structure of cathepsin X: a flip-flop of the ring of His23 allows carboxy-monopeptidase and carboxy-dipeptidase activity of the protease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Validation of protein crystal structures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

New insights into inhibitor design from the crystal structure and NMR studies of Escherichia coli GAR transformylase in complex with beta-GAR and 10-formyl-5,8,10-trideazafolic acid

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

29 September 2017

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Crystal structure of human β2-glycoprotein I: implications for phospholipid binding and the antiphospholipid syndrome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Structural basis for LFA-1 inhibition upon lovastatin binding to the CD11a I-domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Automated protein model building combined with iterative structure refinement

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Structural and conformational requirements for high-affinity binding to the SH2 domain of Grb2(1)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Error estimates of protein structure coordinates and deviations from standard geometry by full-matrix refinement of gammaB- and betaB2-crystallin.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Structure of translation initiation factor 5A from Pyrobaculum aerophilum at 1.75 A resolution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

The SH3 domain of Eps8 exists as a novel intertwined dimer

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Direct observation of protein solvation and discrete disorder with experimental crystallographic phases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

The Protein Data Bank: a computer-based archival file for macromolecular structures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Crystallographic refinement by knowledge-based exploration of complex energy landscapes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Cross-validation tests of time-averaged molecular dynamics refinements for determination of protein structures by X-ray crystallography

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Protein regulation of carotenoid binding; gatekeeper and locking amino acid residues in reaction centers of Rhodobacter sphaeroides

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Likelihood-based refinement. I. Irremovable model errors.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

An assessment of the precision and accuracy of protein structures determined by NMR. Dependence on distance errors.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2483474

Why are protein crystallographic R-values so high?

5 September 2018

1 reference

12 December 2020

Inclusion of thermal motion in crystallographic structures by restrained molecular dynamics

1 reference

12 December 2020

Why protein R-factors are so large: a self-consistent analysis

1 reference

12 December 2020

Is one solution good enough?

1 reference

12 December 2020

Highly constrained multiple-copy refinement of protein crystal structures

1 reference

12 December 2020

An ensemble of crystallographic models enables the description of novel bromate-oxoanion species trapped within a protein crystal

1 reference

12 December 2020

Effect of anisotropy and anharmonicity on protein crystallographic refinement. An evaluation by molecular dynamics

1 reference

12 December 2020

10.1107/S0907444907009791

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17452785%20AND%20SRC:MED&resulttype=core&format=json

29 December 2019

PubMed publication ID

17452785

1 reference