(Q36794987)

16 August 2017

Recommendations for the Generation, Quantification, Storage, and Handling of Peptides Used for Mass Spectrometry-Based Assays (English)

1 reference

16 August 2017

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Sherri R Davies

13

1 reference

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10 June 2020

Wei-Jun Qian

20

1 reference

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10 June 2020

Daniel C. Liebler

49

1 reference

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10 June 2020

28

Ruedi Aebersold

1 reference

10 June 2020

50

Karin D Rodland

1 reference

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10 June 2020

author name string

Jeffrey R Whiteaker

2

1 reference

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10 June 2020

Steven A Carr

3

1 reference

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10 June 2020

Eric Kuhn

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Tao Liu

5

1 reference

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10 June 2020

Sam A Massoni

6

1 reference

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10 June 2020

R Reid Townsend

8

1 reference

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10 June 2020

Lisa J Zimmerman

9

1 reference

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10 June 2020

Emily Boja

10

1 reference

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10 June 2020

Jing Chen

11

1 reference

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10 June 2020

Daniel L Crimmins

12

1 reference

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10 June 2020

Yuqian Gao

14

1 reference

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10 June 2020

Tara R Hiltke

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Karen A Ketchum

16

1 reference

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10 June 2020

Christopher R Kinsinger

17

1 reference

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10 June 2020

Mehdi Mesri

18

1 reference

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10 June 2020

Matthew R Meyer

19

1 reference

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10 June 2020

Regine M Schoenherr

21

1 reference

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10 June 2020

Mitchell G Scott

22

1 reference

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10 June 2020

Tujin Shi

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Gordon R Whiteley

24

1 reference

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10 June 2020

John A Wrobel

25

1 reference

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10 June 2020

Chaochao Wu

26

1 reference

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10 June 2020

Brad L Ackermann

27

1 reference

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10 June 2020

David R Barnidge

29

1 reference

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10 June 2020

David M Bunk

30

1 reference

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10 June 2020

Jordan B Fishman

32

1 reference

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10 June 2020

Russ P Grant

33

1 reference

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10 June 2020

Mark M Kushnir

35

1 reference

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10 June 2020

Mark S Lowenthal

36

1 reference

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10 June 2020

Robert L Moritz

37

1 reference

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10 June 2020

Hendrik Neubert

38

1 reference

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10 June 2020

Scott D Patterson

39

1 reference

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10 June 2020

Alan L Rockwood

40

1 reference

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10 June 2020

John Rogers

41

1 reference

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10 June 2020

Ravinder J Singh

42

1 reference

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10 June 2020

Jennifer E Van Eyk

43

1 reference

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10 June 2020

Steven H Wong

44

1 reference

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10 June 2020

Shucha Zhang

45

1 reference

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10 June 2020

Daniel W Chan

46

1 reference

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10 June 2020

Xian Chen

47

1 reference

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10 June 2020

Matthew J Ellis

48

1 reference

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10 June 2020

Henry Rodriguez

51

1 reference

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10 June 2020

Richard D Smith

52

1 reference

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10 June 2020

Zhen Zhang

53

1 reference

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10 June 2020

Hui Zhang

54

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Amanda G Paulovich

55

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Andrew N Hoofnagle

1

1 reference

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10 June 2020

Ulrike Kusebauch

34

1 reference

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10 June 2020

Nigel Clarke

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

language of work or name

English

0 references

publication date

1 January 2016

1 reference

16 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

62

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

issue

1

1 reference

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10 June 2020

page(s)

48-69

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

First Steps toward Harmonization of LC-MS/MS Thyroglobulin Assays

10 June 2020

cites work

1 reference

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State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet

29 September 2017

1 reference

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Amino acid analysis using chromatography-mass spectrometry: An inter platform comparison study

29 September 2017

1 reference

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Quantitative performance of internal standard platforms for absolute protein quantification using multiple reaction monitoring-mass spectrometry

29 September 2017

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Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma.

29 September 2017

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PhosphoSitePlus, 2014: mutations, PTMs and recalibrations

29 September 2017

1 reference

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Anti-peptide monoclonal antibodies generated for immuno-multiple reaction monitoring-mass spectrometry assays have a high probability of supporting Western blot and ELISA.

29 September 2017

1 reference

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Abundance-based classifier for the prediction of mass spectrometric peptide detectability upon enrichment (PPA).

29 September 2017

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Panorama: a targeted proteomics knowledge base

29 September 2017

1 reference

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Strategies to reduce aspecific adsorption of peptides and proteins in liquid chromatography-mass spectrometry based bioanalyses: an overview

29 September 2017

1 reference

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CPTAC Assay Portal: a repository of targeted proteomic assays

29 September 2017

1 reference

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From lost in translation to paradise found: enabling protein biomarker method transfer by mass spectrometry

29 September 2017

1 reference

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Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach

29 September 2017

1 reference

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Recent advances in amino acid analysis by capillary electromigration methods, 2011-2013.

29 September 2017

1 reference

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Connecting genomic alterations to cancer biology with proteomics: the NCI Clinical Proteomic Tumor Analysis Consortium

29 September 2017

1 reference

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Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple reaction monitoring-MS (LC-MRM-MS)

29 September 2017

1 reference

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Constrained selected reaction monitoring: quantification of selected post-translational modifications and protein isoforms

29 September 2017

1 reference

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Proteoform: a single term describing protein complexity

29 September 2017

1 reference

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Measurement of thyroglobulin by liquid chromatography-tandem mass spectrometry in serum and plasma in the presence of antithyroglobulin autoantibodies

29 September 2017

1 reference

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The state of the human proteome in 2012 as viewed through PeptideAtlas

29 September 2017

1 reference

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Peptide production and decay rates affect the quantitative accuracy of protein cleavage isotope dilution mass spectrometry (PC-IDMS).

29 September 2017

1 reference

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Isotope dilution liquid chromatography-tandem mass spectrometry for quantitative amino acid analysis

29 September 2017

1 reference

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CONSeQuence: prediction of reference peptides for absolute quantitative proteomics using consensus machine learning approaches

29 September 2017

1 reference

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Bioanalytical approaches to analyzing peptides and proteins by LC--MS/MS.

29 September 2017

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mProphet: automated data processing and statistical validation for large-scale SRM experiments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Simultaneous quantification of apolipoprotein A-I and apolipoprotein B by liquid-chromatography-multiple- reaction-monitoring mass spectrometry

29 September 2017

1 reference

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Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

29 September 2017

1 reference

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Automated detection of inaccurate and imprecise transitions in peptide quantification by multiple reaction monitoring mass spectrometry.

29 September 2017

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The fundamental flaws of immunoassays and potential solutions using tandem mass spectrometry

29 September 2017

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Isotope dilution strategies for absolute quantitative proteomics

29 September 2017

1 reference

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Prediction of high-responding peptides for targeted protein assays by mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Quantitative bioanalysis of peptides by liquid chromatography coupled to (tandem) mass spectrometry

29 September 2017

1 reference

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PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows

29 September 2017

1 reference

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Introduction to peptide synthesis

29 September 2017

1 reference

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Reference materials and reference measurement procedures: an overview from a national metrology institute

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Prediction of peptides observable by mass spectrometry applied at the experimental set level

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

PRIDE: new developments and new datasets

29 September 2017

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The Joint Committee for Traceability in Laboratory Medicine (JCTLM): a global approach to promote the standardisation of clinical laboratory test results

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Differential recovery of peptides from sample tubes and the reproducibility of quantitative proteomic data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Scoring proteomes with proteotypic peptide probes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Open source system for analyzing, validating, and storing protein identification data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Analytical procedures for quantification of peptides in pharmaceutical research by liquid chromatography-mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

THE PERIODATE OXIDATION OF AMINO ACIDS WITH REFERENCE TO STUDIES ON GLYCOPROTEINS

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Laser desorption mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Complete amino acid analysis of proteins from a single hydrolysate

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Six-year study of peptide synthesis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Analysis of peptide synthesis products by electrospray ionization mass spectrometry

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Analysis of synthetic peptides by high-performance liquid chromatography

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Improved sensitivity of the nano ultra-high performance liquid chromatography-tandem mass spectrometric analysis of low-concentrated neuropeptides by reducing aspecific adsorption and optimizing the injection solvent.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Interlaboratory agreement of insulin-like growth factor 1 concentrations measured by mass spectrometry

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Verification of in vitro medical diagnostics (IVD) metrological traceability: responsibilities and strategies.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Quantitative insulin analysis using liquid chromatography-tandem mass spectrometry in a high-throughput clinical laboratory.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Correction for isotopic interferences between analyte and internal standard in quantitative mass spectrometry by a nonlinear calibration function.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Introducing AAA-MS, a rapid and sensitive method for amino acid analysis using isotope dilution and high-resolution mass spectrometry

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Comparison of orthogonal liquid and gas chromatography-mass spectrometry platforms for the determination of amino acid concentrations in human plasma

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Certification of NIST standard reference material 2389a, amino acids in 0.1 mol/L HCl--quantification by ID LC-MS/MS.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Peptide storage: are you getting the best return on your investment? Defining optimal storage conditions for proteomics samples

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Toward Système International d'Unité-traceable protein quantification: from amino acids to proteins.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Computational prediction of proteotypic peptides for quantitative proteomics.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

A computational approach toward label-free protein quantification using predicted peptide detectability.

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Assessing analytical specificity in quantitative analysis using tandem mass spectrometry

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Stable isotopically labeled internal standards in quantitative bioanalysis using liquid chromatography/mass spectrometry: necessity or not?

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Effects of adsorption to plastics and solvent conditions in the analysis of the cyanobacterial toxin microcystin-LR by high performance liquid chromatography

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4830481

Investigation of carryover of peptides in nano-liquid chromatography/mass spectrometry using packed and monolithic capillary columns

5 September 2018

1 reference

12 December 2020

Transamination and associated deamidation of asparagine and glutamine

1 reference

12 December 2020

Chromatographic behaviour of peptides following dimethylation with H2/D2-formaldehyde: implications for comparative proteomics

1 reference

12 December 2020

Introduction to peptide synthesis

1 reference

12 December 2020

1 reference

12 December 2020

10.1373/CLINCHEM.2015.250563

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

PubMed publication ID

26719571

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26719571%20AND%20SRC:MED&resulttype=core&format=json