(Q36881872)

16 August 2017

Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping (English)

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Schizosaccharomyces pombe

16 August 2017

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object named as

Schizosaccharomyces pombe

1 reference

Natalie Dutrow

1

1 reference

16 August 2017

David A Nix

2

1 reference

16 August 2017

Derick Holt

3

1 reference

16 August 2017

Brett Milash

4

1 reference

16 August 2017

Brian Dalley

5

1 reference

16 August 2017

Erick Westbroek

6

1 reference

16 August 2017

Timothy J Parnell

7

1 reference

16 August 2017

Bradley R Cairns

8

1 reference

16 August 2017

language of work or name

English

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publication date

20 July 2008

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16 August 2017

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16 August 2017

40

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16 August 2017

977-986

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16 August 2017

8

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https://scigraph.springernature.com/pub.10.1038/ng.196

16 August 2017

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cites work

TER1, the RNA subunit of fission yeast telomerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Identification and characterization of the Schizosaccharomyces pombe TER1 telomerase RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

An RNA polymerase III-dependent heterochromatin barrier at fission yeast centromere 1.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

RNA polymerase: the most specific damage recognition protein in cellular responses to DNA damage?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

RNA maps reveal new RNA classes and a possible function for pervasive transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Genome-wide transcription and the implications for genomic organization

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Genome-wide dynamics of SAPHIRE, an essential complex for gene activation and chromatin boundaries

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Transcriptional noise and the fidelity of initiation by RNA polymerase II.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

An antibody-based microarray assay for small RNA detection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

A high-resolution map of transcription in the yeast genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Antisense transcription in the mammalian transcriptome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

RNAi-mediated targeting of heterochromatin by the RITS complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Global transcriptional responses of fission yeast to environmental stress

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

cis-acting DNA from fission yeast centromeres mediates histone H3 methylation and recruitment of silencing factors and cohesin to an ectopic site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Small RNAs correspond to centromere heterochromatic repeats

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

The genome sequence of Schizosaccharomyces pombe

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Centromeres of the fission yeast Schizosaccharomyces pombe are highly variable genetic loci

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Position effect variegation at fission yeast centromeres.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

The centromeric K-type repeat and the central core are together sufficient to establish a functional Schizosaccharomyces pombe centromere

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

A novel sequence common to the centromere regions of Schizosaccharomyces pombe chromosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Analysis of centromeric DNA in the fission yeast Schizosaccharomyces pombe

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Characterization of monoclonal antibody to DNA.RNA and its application to immunodetection of hybrids

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

A low copy number central sequence with strict symmetry and unusual chromatin structure in fission yeast centromere

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Chromosome walking shows a highly homologous repetitive sequence present in all the centromere regions of fission yeast.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2538488

Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome

4 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18641648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A role for TFIIIC transcription factor complex in genome organization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18641648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18641648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.196

1 reference

16 August 2017

1 reference

16 August 2017

1 reference