(Q36921764)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

title

A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

author

Pratip K. Chattopadhyay

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Sofie Van Gassen

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Miron Bartosz Kursa

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Geoffrey McLachlan

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Yvan Saeys

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Greg Finak

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Ryan R Brinkman

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Richard H. Scheuermann

22

object named as

Richard H Scheuermann

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

1

Nima Aghaeepour

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

21

Garry P Nolan

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

19

Raphael Gottardo

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

3

Maria Chikina

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Bart N Lambrecht

7

0 references

author name string

Tom Dhaene

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Mehrnoush Malek

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Yu Qian

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Peng Qiu

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Rick Stanton

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Dong Tong

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Celine Vens

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Sławomir Walkowiak

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Kui Wang

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Tim Mosmann

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

publication date

8 October 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

volume

89

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

page(s)

16-21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

26 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

gEM/GANN: A multivariate computational strategy for auto-characterizing relationships between cellular and clinical phenotypes and predicting disease progression time using high-dimensional flow cytometry data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Clinical recovery from surgery correlates with single-cell immune signatures

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

OpenCyto: an open source infrastructure for scalable, robust, reproducible, and automated, end-to-end flow cytometry data analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

CCAST: a model-based gating strategy to isolate homogeneous subpopulations in a heterogeneous population of single cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Automated identification of stratifying signatures in cellular subpopulations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Enhanced flowType/RchyOptimyx: a BioConductor pipeline for discovery in high-dimensional cytometry data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Flow cytometry bioinformatics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Automatic Classification of Cellular Expression by Nonlinear Stochastic Embedding (ACCENSE).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Critical assessment of automated flow cytometry data analysis techniques.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

RchyOptimyx: cellular hierarchy optimization for flow cytometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

flowPeaks: a fast unsupervised clustering for flow cytometry data via K-means and density peak finding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Properties of mouse and human IgG receptors and their contribution to disease models

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

FCSTrans: an open source software system for FCS file conversion and data transformation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Update for the logicle data scale including operational code implementations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Hybrid genetic algorithm-neural network: feature extraction for unpreprocessed microarray data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Plasma levels of soluble CD14 independently predict mortality in HIV infection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Evidence of dysregulation of dendritic cells in primary HIV infection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Good cell, bad cell: flow cytometry reveals T-cell subsets important in HIV disease

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Immunologic and virologic events in early HIV infection predict subsequent rate of progression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

FlowFP: A Bioconductor Package for Fingerprinting Flow Cytometric Data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Per-channel basis normalization methods for flow cytometry data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

The level of monocyte turnover predicts disease progression in the macaque model of AIDS.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Role for plasmacytoid dendritic cells in anti-HIV innate immunity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Immune activation and CD8+ T-cell differentiation towards senescence in HIV-1 infection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Probability binning comparison: a metric for quantitating univariate distribution differences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Significance analysis of microarrays applied to the ionizing radiation response

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

FlowRepository: a resource of annotated flow cytometry datasets associated with peer-reviewed publications.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

Amine reactive dyes: an effective tool to discriminate live and dead cells in polychromatic flow cytometry

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4874734

FloReMi: Flow density survival regression using minimal feature redundancy

4 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FCYTO.A.22732

Increasing Age at HIV Seroconversion From 18 to 40 Years Is Associated With Favorable Virologic and Immunologic Responses to HAART

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FCYTO.A.22732

A non-parametric Bayesian model for joint cell clustering and cluster matching: identification of anomalous sample phenotypes with random effects

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FCYTO.A.22732

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1002/CYTO.A.22732

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

PubMed publication ID

26447924

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26447924%20AND%20SRC:MED&resulttype=core&format=json