(Q36923789)

17 August 2017

Revisiting the carboxylic acid dimers in aqueous solution: interplay of hydrogen bonding, hydrophobic interactions, and entropy (English)

1 reference

17 August 2017

1 reference

3

Harold A Scheraga

1 reference

17 August 2017

2

Charles L Brooks

1 reference

17 August 2017

Jianhan Chen

1

1 reference

PMC publication ID

2561919

17 August 2017

language of work or name

English

0 references

publication date

19 September 2007

1 reference

Journal of Physical Chemistry B

17 August 2017

1 reference

17 August 2017

112

1 reference

17 August 2017

2

1 reference

17 August 2017

242-249

1 reference

All-atom empirical potential for molecular modeling and dynamics studies of proteins

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

A backbone-based theory of protein folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

The role of hydrophobic interactions in initiation and propagation of protein folding

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Interfaces and the driving force of hydrophobic assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Context-dependent contributions of backbone hydrogen bonding to beta-sheet folding energetics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

On the calculation of absolute macromolecular binding free energies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

An atomically detailed study of the folding pathways of protein A with the stochastic difference equation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Contribution of translational and rotational motions to molecular association in aqueous solution

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Temperature and length scale dependence of hydrophobic effects and their possible implications for protein folding.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Thermodynamics of interactions between amino acid side chains: experimental differentiation of aromatic-aromatic, aromatic-aliphatic, and aliphatic-aliphatic side-chain interactions in water.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Theory of hydrophobic interactions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

The statistical-thermodynamic basis for computation of binding affinities: a critical review

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Thermodynamics of hydrogen bond and hydrophobic interactions in cyclodextrin complexes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Contribution of hydration to protein folding thermodynamics. II. The entropy and Gibbs energy of hydration

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Influence of temperature, friction, and random forces on folding of the B-domain of staphylococcal protein A: all-atom molecular dynamics in implicit solvent.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Modeling nonionic aqueous solutions: the acetone-water mixture

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Early collapse is not an obligate step in protein folding

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2561919

Calculations of solute and solvent entropies from molecular dynamics simulations

4 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17880128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A Kirkwood-Buff derived force field for amides

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17880128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Entropy changes accompanying association reactions of proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17880128

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/JP074355H

1 reference

17 August 2017

1 reference

PMC publication ID

2561919

17 August 2017

PubMed publication ID

17880128

1 reference

PMC publication ID

2561919