Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q36932470)
Watch
English
RNA polymerase approaches its promoter without long-range sliding along DNA
scientific article published on 29 May 2013
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
title
RNA polymerase approaches its promoter without long-range sliding along DNA
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
author
Larry J Friedman
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
author name string
Jeffrey P Mumm
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
Jeff Gelles
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
language of work or name
English
0 references
publication date
29 May 2013
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
published in
Proceedings of the National Academy of Sciences of the United States of America
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
volume
110
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
issue
24
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
page(s)
9740-9745
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
cites work
Single-molecule imaging reveals target-search mechanisms during DNA mismatch repair
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
The role of bacterial enhancer binding proteins as specialized activators of σ54-dependent transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Activating transcription in bacteria.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Conservation between the RNA polymerase I, II, and III transcription initiation machineries
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Mechanism of transcriptional repression at a bacterial promoter by analysis of single molecules
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Dancing on DNA: kinetic aspects of search processes on DNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Mechanism of bacterial transcription initiation: RNA polymerase - promoter binding, isomerization to initiation-competent open complexes, and initiation of RNA synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Single-molecule studies of transcription: from one RNA polymerase at a time to the gene expression profile of a cell
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Reduced capacity of alternative sigmas to melt promoters ensures stringent promoter recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
An end to 40 years of mistakes in DNA-protein association kinetics?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Nucleosome positioning and gene regulation: advances through genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Quantitative transcription factor binding kinetics at the single-molecule level
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Advances in bacterial promoter recognition and its control by factors that do not bind DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Modus operandi of the bacterial RNA polymerase containing the sigma54 promoter-specificity factor
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
The role of chromatin during transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Viewing dynamic assembly of molecular complexes by multi-wavelength single-molecule fluorescence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Single-molecule analysis of RNA polymerase transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
RNA polymerase can track a DNA groove during promoter search
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Multiple Sigma Subunits and the Partitioning of Bacterial Transcription Space
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
UPs and downs in bacterial transcription initiation: the role of the alpha subunit of RNA polymerase in promoter recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Direct observation of one-dimensional diffusion and transcription by Escherichia coli RNA polymerase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Single-molecule imaging of RNA polymerase-DNA interactions in real time
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Involvement of outside DNA sequences in the major kinetic path by which EcoRI endonuclease locates and leaves its recognition sequence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Diffusion-controlled macromolecular interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Kinetics of protein-nucleic acid interactions: use of salt effects to probe mechanisms of interaction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
One-dimensional diffusion of Escherichia coli DNA-dependent RNA polymerase: a mechanism to facilitate promoter location
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Probing the Escherichia coli glnALG upstream activation mechanism in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
Nonspecific interactions of Escherichia coli RNA polymerase with native and denatured DNA: differences in the binding behavior of core and holoenzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
29 September 2017
The promoter-search mechanism of Escherichia coli RNA polymerase is dominated by three-dimensional diffusion
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Mechanism of transcription initiation at an activator-dependent promoter defined by single-molecule observation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Protein-DNA interactions that govern AAA+ activator-dependent bacterial transcription initiation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Visualization of single molecules of RNA polymerase sliding along DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Direct evidence for the preferential binding of Escherichia coli RNA polymerase holoenzyme to the ends of deoxyribonucleic acid restriction fragments
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Kinetics and mechanism of the interaction of Escherichia coli RNA polymerase with the λPR promoter
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Promoter search by Escherichia coli RNA polymerase on a circular DNA template
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Kinetics of promoter search by Escherichia coli RNA polymerase. Effects of monovalent and divalent cations and temperature.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
Function of a bacterial activator protein that binds to transcriptional enhancers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
27 June 2018
The lac repressor displays facilitated diffusion in living cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
4 September 2018
rRNA promoter regulation by nonoptimal binding of sigma region 1.2: an additional recognition element for RNA polymerase.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
4 September 2018
Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
4 September 2018
Molecular mechanism of promoter selection in gene transcription. I. Development of a rapid mixing-photocrosslinking technique to study the kinetics of Escherichia coli RNA polymerase binding to T7 DNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
4 September 2018
Nitrocellulose filter binding studies of the interactions of Escherichia coli RNA polymerase holoenzyme with deoxyribonucleic acid restriction fragments: evidence for multiple classes of nonpromoter interactions, some of which display promoter-like p
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3683791
retrieved
20 October 2018
Molecular mechanism of promoter selection in gene transcription. II. Kinetic evidence for promoter search by a one-dimensional diffusion of RNA polymerase molecule along the DNA template
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23720315
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1073/PNAS.1300221110
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
ADS bibcode
2013PNAS..110.9740F
0 references
PMC publication ID
3683791
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
PubMed publication ID
23720315
1 reference
stated in
Europe PubMed Central
PMC publication ID
3683791
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23720315%20AND%20SRC:MED&resulttype=core&format=json
retrieved
2 March 2020
ResearchGate publication ID
236968490
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit