(Q36960668)

17 August 2017

RUbioSeq: a suite of parallelized pipelines to automate exome variation and bisulfite-seq analyses (English)

1 reference

17 August 2017

1 reference

4

1 reference

17 August 2017

José M Fernández

3

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Gonzalo Gómez-López

object named as

Gonzalo Gómez-López

series ordinal

2

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David G. Pisano

object named as

David G Pisano

series ordinal

5

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author name string

Miriam Rubio-Camarillo

series ordinal

1

1 reference

PMC publication ID

3694642

17 August 2017

language of work or name

English

0 references

publication date

28 April 2013

1 reference

17 August 2017

1 reference

17 August 2017

29

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17 August 2017

13

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17 August 2017

1687-1689

1 reference

New mutations in chronic lymphocytic leukemia identified by target enrichment and deep sequencing

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

CONTRA: copy number analysis for targeted resequencing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Detecting and annotating genetic variations using the HugeSeq pipeline

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

DNA methylome analysis using short bisulfite sequencing data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

NARWHAL, a primary analysis pipeline for NGS data.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

The variant call format and VCFtools

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

A framework for variation discovery and genotyping using next-generation DNA sequencing data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Deriving the consequences of genomic variants with the Ensembl API and SNP Effect Predictor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Galaxy: a web-based genome analysis tool for experimentalists

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

BFAST: an alignment tool for large scale genome resequencing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Human DNA methylomes at base resolution show widespread epigenomic differences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

The Sequence Alignment/Map format and SAMtools

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Fast and accurate short read alignment with Burrows-Wheeler transform

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694642

10.1093/BIOINFORMATICS/BTT203

29 September 2017

Identifiers

DOI

1 reference

journals/bioinformatics/Rubio-CamarilloGFVP13

17 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

3694642

17 August 2017

PubMed publication ID

23630175

1 reference

PMC publication ID

3694642