(Q36977594)

17 August 2017

The mean and variance of phylogenetic diversity under rarefaction (English)

1 reference

17 August 2017

1 reference

David A Nipperess

1

1 reference

PMC publication ID

3699894

17 August 2017

Frederick A Matsen

series ordinal

2

1 reference

17 August 2017

1 June 2013

1 reference

Methods in Ecology and Evolution

17 August 2017

1 reference

17 August 2017

4

1 reference

17 August 2017

6

1 reference

17 August 2017

566-572

1 reference

Phylogenetic diversity theory sheds light on the structure of microbial communities

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Bacterial communities in women with bacterial vaginosis: high resolution phylogenetic analyses reveal relationships of microbiota to clinical criteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Microbiome analysis among bats describes influences of host phylogeny, life history, physiology and geography

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

The Western English Channel contains a persistent microbial seed bank

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Phylogenetic diversity as a window into the evolutionary and biogeographic histories of present-day richness gradients for mammals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Spatial patterns of phylogenetic diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Phylogenetic diversity measures based on Hill numbers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

The cladistic basis for the phylogenetic diversity (PD) measure links evolutionary features to environmental gradients and supports broad applications of microbial ecology's "phylogenetic beta diversity" framework

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Phylogenetic endemism: a new approach for identifying geographical concentrations of evolutionary history

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

A new phylogenetic diversity measure generalizing the shannon index and its application to phyllostomid bats

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Using phylogenetic, functional and trait diversity to understand patterns of plant community productivity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

The role of the phylogenetic diversity measure, PD, in bio-informatics: getting the definition right.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

A core gut microbiome in obese and lean twins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Species divergence and the measurement of microbial diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Distribution of phylogenetic diversity under random extinction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Resource-aware taxon selection for maximizing phylogenetic diversity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

The delayed rise of present-day mammals

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Preserving the evolutionary potential of floras in biodiversity hotspots

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

MEGAN analysis of metagenomic data

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Additive partitioning of rarefaction curves and species-area relationships: unifying alpha-, beta- and gamma-diversity with sample size and habitat area

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Molecular identification of bacteria associated with bacterial vaginosis.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Reliability of diagnosing bacterial vaginosis is improved by a standardized method of gram stain interpretation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Coverage-based rarefaction and extrapolation: standardizing samples by completeness rather than size

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3699894

Diversity and Evenness: A Unifying Notation and Its Consequences

4 September 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

The Nonconcept of Species Diversity: A Critique and Alternative Parameters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

Terrestrial Ecoregions of the World: A New Map of Life on Earth

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

Discovering and rediscovering the sample-based rarefaction formula in the ecological literature

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

Environmental predictors of global parrot (Aves: Psittaciformes) species richness and phylogenetic diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

Using generalized dissimilarity modelling to analyse and predict patterns of beta diversity in regional biodiversity assessment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2F2041-210X.12042

21 January 2018

Identifiers

DOI

10.1111/2041-210X.12042

1 reference

17 August 2017

1 reference

1 reference

PMC publication ID

3699894

17 August 2017

PubMed publication ID

23833701

1 reference

PMC publication ID

3699894