(Q36990893)

17 August 2017

Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna (English)

1 reference

17 August 2017

0 references

1 reference

whole genome sequencing

1 reference

14

Vishwajit Sur Chowdhury

1 reference

17 August 2017

23

Takashi Gojobori

1 reference

17 August 2017

Kazuki Mori

2

0 references

Kazuho Ikeo

20

object named as

Kazuho Ikeo

1 reference

17 August 2017

1

Yoji Nakamura

1 reference

17 August 2017

8

Nobuhiko Ojima

1 reference

17 August 2017

11

Motoshige Yasuike

1 reference

17 August 2017

7

Yuya Shigenobu

1 reference

17 August 2017

15

Takanori Kobayashi

1 reference

17 August 2017

16

Kazuhiro Nakajima

1 reference

17 August 2017

17

Motohiko Sano

1 reference

17 August 2017

18

Tokio Wada

1 reference

17 August 2017

22

Satoru Kuhara

1 reference

17 August 2017

24

Kiyoshi Inouye

1 reference

17 August 2017

Kenji Saitoh

3

1 reference

17 August 2017

Kenshiro Oshima

4

1 reference

17 August 2017

Miyuki Mekuchi

5

1 reference

17 August 2017

Takuma Sugaya

6

1 reference

17 August 2017

Shigeru Muta

9

1 reference

17 August 2017

Atushi Fujiwara

10

1 reference

17 August 2017

Ichiro Oohara

12

1 reference

17 August 2017

Hideki Hirakawa

13

1 reference

17 August 2017

Kosuke Tashiro

19

1 reference

17 August 2017

Masahira Hattori

21

1 reference

17 August 2017

language of work or name

English

0 references

publication date

18 June 2013

1 reference

Proceedings of the National Academy of Sciences of the United States of America

17 August 2017

1 reference

17 August 2017

110

1 reference

17 August 2017

27

1 reference

17 August 2017

11061-11066

1 reference

Opsin gene duplication and divergence in ray-finned fish

17 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Visual spectral sensitivity of photopic juvenile Pacific bluefin tuna (Thunnus orientalis).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The genome sequence of Atlantic cod reveals a unique immune system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Conservation. High value and long life--double jeopardy for tunas and billfishes.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

On the origin and trigger of the notothenioid adaptive radiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Molecular basis of spectral tuning in the red- and green-sensitive (M/LWS) pigments in vertebrates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The molecular basis of color vision in colorful fish: four long wave-sensitive (LWS) opsins in guppies (Poecilia reticulata) are defined by amino acid substitutions at key functional sites

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Evolution of vertebrate visual pigments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The new paradigm of flow cell sequencing.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Visual sensitivities tuned by heterochronic shifts in opsin gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Recent developments in the MAFFT multiple sequence alignment program

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Time scale for cyclostome evolution inferred with a phylogenetic diagnosis of hagfish and lamprey cDNA sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Evolution of the cichlid visual palette through ontogenetic subfunctionalization of the opsin gene arrays.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Functional characterization of visual opsin repertoire in Medaka (Oryzias latipes).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Opsins: evolution in waiting

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Molecular evolution of color vision in vertebrates

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Molecular genetics and the evolution of ultraviolet vision in vertebrates.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Migratory movements, depth preferences, and thermal biology of Atlantic bluefin tuna

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Crystal structure of rhodopsin: A G protein-coupled receptor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Molecular evolution of vertebrate visual pigments

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae)

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The neighbor-joining method: a new method for reconstructing phylogenetic trees

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Glutamic acid-113 serves as the retinylidene Schiff base counterion in bovine rhodopsin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Genes expressed in Blue Fin Tuna (Thunnus thynnus) liver and gonads

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Lifting the cloak of invisibility: the effects of changing optical conditions on pelagic crypsis.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The influence of ontogeny and light environment on the expression of visual pigment opsins in the retina of the black bream, Acanthopagrus butcheri.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Convergent loss of an anciently duplicated, functionally divergent RH2 opsin gene in the fugu and Tetraodon pufferfish lineages

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Temporal and spatial changes in the expression pattern of multiple red and green subtype opsin genes during zebrafish development.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Reconstitution of ancestral green visual pigments of zebrafish and molecular mechanism of their spectral differentiation

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Spectral differentiation of blue opsins between phylogenetically close but ecologically distant goldfish and zebrafish

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

The molecular basis for spectral tuning of rod visual pigments in deep-sea fish.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Evolutionary analysis of cytochrome b sequences in some Perciformes: evidence for a slower rate of evolution than in mammals

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3703999

Visual pigments and visual range underwater

4 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23781100

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Changes in the scotopic vision of juvenile Pacific bluefin tuna (Thunnus orientalis) with growth

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23781100

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1302051110

1 reference

17 August 2017

0 references

1 reference

17 August 2017

PubMed publication ID

23781100

1 reference