(Q36993051)

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Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues

scientific article published on 19 September 2008

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scholarly article

1 reference

Europe PubMed Central

17 August 2017

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues (English)

1 reference

Europe PubMed Central

17 August 2017

1 reference

based on heuristic

inferred from title

Sampsa Hautaniemi

18

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Europe PubMed Central

17 August 2017

Olli-Pekka Kallioniemi

19

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Europe PubMed Central

17 August 2017

John-Patrick Mpindi

11

object named as

John-Patrick Mpindi

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Europe PubMed Central

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Elmar Bucher

5

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Reija Autio

2

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Matthias Nees

17

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Jaakko Astola

16

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Rolf Inge Skotheim

9

object named as

Rolf I Skotheim

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Europe PubMed Central

17 August 2017

14

object named as

Henrik Edgren

1 reference

Europe PubMed Central

17 August 2017

Kristiina Iljin

4

object named as

Kristiina Iljin

1 reference

Europe PubMed Central

17 August 2017

author name string

Sami Kilpinen

1

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Europe PubMed Central

17 August 2017

Kalle Ojala

3

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Europe PubMed Central

17 August 2017

Henri Sara

6

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Europe PubMed Central

17 August 2017

Tommi Pisto

7

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Europe PubMed Central

17 August 2017

Matti Saarela

8

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Europe PubMed Central

17 August 2017

Mari Björkman

10

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Europe PubMed Central

17 August 2017

Saija Haapa-Paananen

12

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Europe PubMed Central

17 August 2017

Paula Vainio

13

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Europe PubMed Central

17 August 2017

Maija Wolf

15

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Europe PubMed Central

17 August 2017

publication date

19 September 2008

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Europe PubMed Central

17 August 2017

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Europe PubMed Central

17 August 2017

9

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Europe PubMed Central

17 August 2017

R139

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Europe PubMed Central

17 August 2017

9

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Europe PubMed Central

17 August 2017

https://scigraph.springernature.com/pub.10.1186/gb-2008-9-9-r139

0 references

The utility of MAS5 expression summary and detection call algorithms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks

1 reference

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29 September 2017

Celsius: a community resource for Affymetrix microarray data

1 reference

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Significance, detection and markers of disseminated breast cancer cells

1 reference

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TMPRSS2 fusions with oncogenic ETS factors in prostate cancer involve unbalanced genomic rearrangements and are associated with HDAC1 and epigenetic reprogramming

1 reference

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29 September 2017

Probe set algorithms: is there a rational best bet?

1 reference

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29 September 2017

Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons

1 reference

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29 September 2017

Integrating probe-level expression changes across generations of Affymetrix arrays

1 reference

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Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

1 reference

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29 September 2017

Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

Transformation of expression intensities across generations of Affymetrix microarrays using sequence matching and regression modeling.

1 reference

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29 September 2017

The human tumor antigen PRAME is a dominant repressor of retinoic acid receptor signaling

1 reference

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29 September 2017

Mining for regulatory programs in the cancer transcriptome

1 reference

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29 September 2017

Independence and reproducibility across microarray platforms

1 reference

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29 September 2017

Correlation test to assess low-level processing of high-density oligonucleotide microarray data

1 reference

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Cancer/testis antigens and gametogenesis: a review and "brain-storming" session

1 reference

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29 September 2017

Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

1 reference

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29 September 2017

1 reference

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29 September 2017

The functional landscape of mouse gene expression

1 reference

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29 September 2017

Combining gene expression data from different generations of oligonucleotide arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

A module map showing conditional activity of expression modules in cancer

1 reference

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29 September 2017

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox

1 reference

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29 September 2017

Are data from different gene expression microarray platforms comparable?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

Coexpression analysis of human genes across many microarray data sets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

ONCOMINE: a cancer microarray database and integrated data-mining platform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

Adjustment of systematic microarray data biases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

Effects of Herceptin treatment on global gene expression patterns in HER2-amplified and nonamplified breast cancer cell lines

1 reference

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29 September 2017

Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

DAVID: Database for Annotation, Visualization, and Integrated Discovery

1 reference

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29 September 2017

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2592717

29 September 2017

ArrayExpress--a public repository for microarray gene expression data at the EBI

1 reference

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Efficacy and safety of imatinib mesylate in advanced gastrointestinal stromal tumors

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Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

1 reference

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Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

1 reference

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Gene ontology: tool for the unification of biology

1 reference

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Synexpression groups in eukaryotes

1 reference

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Cluster analysis and display of genome-wide expression patterns

1 reference

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Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays.

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Myelin-associated glycoprotein immunoreactive material: an early neuronal marker of dorsal root ganglion cells during chick development.

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Distribution of 15 human kallikreins in tissues and biological fluids.

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Fusing microarray experiments with multivariate regression.

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Elevated expression of the AF1q gene, an MLL fusion partner, is an independent adverse prognostic factor in pediatric acute myeloid leukemia.

1 reference

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Genome-wide discovery of transcriptional modules from DNA sequence and gene expression.

1 reference

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Classification of pediatric acute lymphoblastic leukemia by gene expression profiling

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GFAP promoter directs astrocyte-specific expression in transgenic mice.

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1 reference

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1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18803840

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Identifiers

10.1186/GB-2008-9-9-R139

1 reference

Europe PubMed Central

17 August 2017

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1 reference

Europe PubMed Central

17 August 2017

1 reference

Europe PubMed Central

17 August 2017

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