(Q37055664)

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Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

Analysis, characterization, and loci of the tuf genes in lactobacillus and bifidobacterium species and their direct application for species identification (English)

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

species identification

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1

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20 December 2019

Carlos Canchaya

2

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20 December 2019

Todd R. Klaenhammer

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object named as

Todd R Klaenhammer

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20 December 2019

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Valèrie Meylan

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20 December 2019

Ralf Zink

5

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20 December 2019

language of work or name

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1 November 2003

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20 December 2019

Applied and Environmental Microbiology

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

69

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20 December 2019

11

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Europe PubMed Central

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20 December 2019

6908-6922

1 reference

Europe PubMed Central

PMC publication ID

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20 December 2019

A conformational analysis of Walker motif A [GXXXXGKT (S)] in nucleotide-binding and other proteins

1 reference

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29 September 2017

Rapid identification, differentiation, and proposed new taxonomic classification of Bifidobacterium lactis.

1 reference

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29 September 2017

The genome sequence of Bifidobacterium longum reflects its adaptation to the human gastrointestinal tract

1 reference

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29 September 2017

Binding specificity of Escherichia coli trigger factor

1 reference

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29 September 2017

Differentiation of Lactobacillus plantarum, L. pentosus, and L. paraplantarum by recA gene sequence analysis and multiplex PCR assay with recA gene-derived primers

1 reference

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29 September 2017

Development of a PCR assay for identification of staphylococci at genus and species levels

1 reference

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29 September 2017

Specific identification and targeted characterization of Bifidobacterium lactis from different environmental isolates by a combined multiplex-PCR approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Evidence for horizontal gene transfer in evolution of elongation factor Tu in enterococci

1 reference

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29 September 2017

Cloning and characterization of the str operon and elongation factor Tu expression in Bacillus stearothermophilus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Development of a PCR assay for rapid detection of enterococci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Identification of Lactobacillus isolates from the gastrointestinal tract, silage, and yoghurt by 16S-23S rRNA gene intergenic spacer region sequence comparisons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

The groESL chaperone operon of Lactobacillus johnsonii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Crystal structure of intact elongation factor EF-Tu from Escherichia coli in GDP conformation at 2.05 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

1 reference

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29 September 2017

Discovery and classification of ecological diversity in the bacterial world: the role of DNA sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Polyphasic taxonomy, a consensus approach to bacterial systematics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

The RecA protein as a model molecule for molecular systematic studies of bacteria: comparison of trees of RecAs and 16S rRNAs from the same species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Genetic and molecular analysis of the tRNA-tufB operon of the myxobacterium Stigmatella aurantiaca

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Differentiation of Lactobacillus strains by ribotyping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Duplication of the tuf gene: a new insight into the phylogeny of eubacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

The sequence of the gene encoding elongation factor Tu from Chlamydia trachomatis compared with those of other organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Protein quality control: triage by chaperones and proteases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

29 September 2017

Cloning and molecular analysis of promoter-like sequences isolated from the chromosomal DNA of Lactobacillus acidophilus ATCC 4356.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

16S rRNA and 16S to 23S Internal Transcribed Spacer Sequence Analyses Reveal Inter- and Intraspecific Bifidobacterium Phylogeny

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

Three tuf-like genes in the kirromycin producer Streptomyces ramocissimus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

Identification and classification of Lactobacillus acidophilus, L. gasseri and L. johnsonii strains by SDS-PAGE and rRNA-targeted oligonucleotide probe hybridization.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

Dual function transcripts specifying tRNA and mRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

Molecular cloning, nucleotide sequence and expression of the tufB gene encoding elongation factor Tu from Thermus thermophilus HB8.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

27 June 2018

Comparison of partial tuf gene sequences for the identification of lactobacilli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

Specific identification and molecular typing analysis of Lactobacillus johnsonii by using PCR-based methods and pulsed-field gel electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

Comparative sequence analysis of a recA gene fragment brings new evidence for a change in the taxonomy of the Lactobacillus casei group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

Evolution of tuf genes: ancient duplication, differential loss and gene conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

Molecular differentiation of Bifidobacterium species with amplified ribosomal DNA restriction analysis and alignment of short regions of the ldh gene.

1 reference

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4 September 2018

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1 reference

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4 September 2018

Structure and expression of elongation factor Tu from Bacillus stearothermophilus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262312

4 September 2018

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1 reference

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1 reference

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12 December 2020

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inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid amplified ribosomal DNA restriction analysis (ARDRA) identification of Lactobacillus spp. isolated from fecal and vaginal samples

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plasmids in the genus Bifidobacterium

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of two copies of the gene for the elongation factor EF–Tu in E. Coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic relationships of Bacteria based on comparative sequence analysis of elongation factor Tu and ATP-synthase beta-subunit genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete nucleotide sequences of seven eubacterial genes coding for the elongation factor Tu: functional, structural and phylogenetic evaluations

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602655

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.69.11.6908-6922.2003

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14602655%20AND%20SRC:MED&resulttype=core&format=json

20 December 2019

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