(Q37080328)

18 August 2017

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title

An overview of cardiac systems biology (English)

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18 August 2017

Pradeep Kumar Shreenivasaiah

1

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18 August 2017

Seong-Hwan Rho

2

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18 August 2017

Taeyong Kim

3

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18 August 2017

Do Han Kim

4

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18 August 2017

3 January 2008

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Journal of Molecular and Cellular Cardiology

18 August 2017

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18 August 2017

44

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18 August 2017

3

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18 August 2017

460-469

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Resources for integrative systems biology: from data through databases to networks and dynamic system models

18 August 2017

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Systems biology: a brief overview

7 January 2021

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Computational systems biology

7 January 2021

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7 January 2021

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Network biology: understanding the cell's functional organization

7 January 2021

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Emergence of Scaling in Random Networks

7 January 2021

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Molecular genetics and genomics of heart failure

7 January 2021

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Redefining heart failure: the utility of genomics

7 January 2021

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Genome informatics: current status and future prospects

7 January 2021

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Proteomics of the heart: unraveling disease

7 January 2021

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Proteomics: state of the art and its application in cardiovascular research

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardiovascular proteomics: evolution and potential

7 January 2021

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Biomarkers of cardiovascular disease: molecular basis and practical considerations

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardiovascular proteomics: past, present, and future

7 January 2021

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Proteomics in cardiovascular surgery

7 January 2021

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Metabolic profiles to define the genome: can we hear the phenotypes?

7 January 2021

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NCBI GEO standards and services for microarray data.

7 January 2021

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NCBI GEO: mining tens of millions of expression profiles--database and tools update

7 January 2021

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Comprehensive identification and characterization of novel cardiac genes in mouse.

7 January 2021

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Cardiac physiology at the cellular level: use of cultured HL-1 cardiomyocytes for studies of cardiac muscle cell structure and function

7 January 2021

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7 January 2021

Cardiac systems biology

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Age-associated cardiac dysfunction in Drosophila melanogaster

7 January 2021

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Structure and function of the developing zebrafish heart.

7 January 2021

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The model organism as a system: integrating 'omics' data sets

7 January 2021

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Proteomics and metabolomics combined in cardiovascular research

7 January 2021

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A data integration methodology for systems biology

7 January 2021

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A data integration methodology for systems biology: experimental verification

7 January 2021

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7 January 2021

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Database resources of the National Center for Biotechnology Information

7 January 2021

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The Universal Protein Resource (UniProt).

7 January 2021

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GOAnnotator: linking protein GO annotations to evidence text

7 January 2021

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New developments in the InterPro database

7 January 2021

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Human protein reference database--2006 update

7 January 2021

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The KEGG resource for deciphering the genome

7 January 2021

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GeneCards 2002: towards a complete, object-oriented, human gene compendium

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

GeneLynx: a gene-centric portal to the human genome

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

GeneLynx mouse: integrated portal to the mouse genome

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Genatlas database, genes and development defects.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

MitoProteome: mitochondrial protein sequence database and annotation system

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardio: a web-based knowledge resource of genes and proteins related to cardiovascular disease

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

HCNet: a database of heart and calcium functional network

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

A top-level ontology of functions and its application in the Open Biomedical Ontologies.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Gene ontology: tool for the unification of biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

A reference ontology for biomedical informatics: the Foundational Model of Anatomy

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Publishing on the semantic web

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

From XML to RDF: how semantic web technologies will change the design of 'omic' standards

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

A review of standards for data exchange within systems biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Systems biology standards—the community speaks

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Standards for systems biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Ontologies in biology: design, applications and future challenges

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Are the current ontologies in biology good ontologies?

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Data standards for 'omic' science

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Emergent properties of networks of biological signaling pathways

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Stationary and drifting spiral waves of excitation in isolated cardiac muscle

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Using process diagrams for the graphical representation of biological networks

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Tools for visually exploring biological networks.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Getting connected: analysis and principles of biological networks

7 January 2021

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Hierarchical thinking in network biology: the unbiased modularization of biochemical networks.

7 January 2021

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Genomic approaches for reconstructing gene networks

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Analyzing cellular biochemistry in terms of molecular networks

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Scale-free networks in cell biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

How to infer gene networks from expression profiles.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Systems biology approaches to metabolic and cardiovascular disorders: network perspectives of cardiovascular metabolism

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Integrating genetic and gene expression data: application to cardiovascular and metabolic traits in mice

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Network analysis of human in-stent restenosis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Thematic review series: The pathogenesis of atherosclerosis. Toward a biological network for atherosclerosis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

7 January 2021

Biological robustness

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Integrating 'omic' information: a bridge between genomics and systems biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Systems biology and the heart

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Building with a scaffold: emerging strategies for high- to low-level cellular modeling

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Towards a proteome-scale map of the human protein–protein interaction network

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome

7 January 2021

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A comprehensive pathway map of epidermal growth factor receptor signaling

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Comparison of human protein-protein interaction maps.

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Dynamic analysis of optimality in myocardial energy metabolism under normal and ischemic conditions

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardiac Action and Pacemaker Potentials based on the Hodgkin-Huxley Equations

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

A model of cardiac electrical activity incorporating ionic pumps and concentration changes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Functionally and structurally integrated computational modeling of ventricular physiology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

The future: putting Humpty-Dumpty together again

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Computational biology of cardiac myocytes: proposed standards for the physiome.

7 January 2021

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A strategy for integrative computational physiology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Integration from proteins to organs: the IUPS Physiome Project

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

The ongoing journey to understand heart function through integrative modeling

7 January 2021

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A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardiac Ca2+ dynamics: the roles of ryanodine receptor adaptation and sarcoplasmic reticulum load

7 January 2021

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Molecular interactions between two long-QT syndrome gene products, HERG and KCNE2, rationalized by in vitro and in silico analysis

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Cardiac sodium channel Markov model with temperature dependence and recovery from inactivation

7 January 2021

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Modeling short-term interval-force relations in cardiac muscle

7 January 2021

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Modeling short-term interval-force relations in cardiac muscle

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Incorporation of myofilament activation mechanics into a lumped model of the human heart

7 January 2021

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A quantitative analysis of cardiac myocyte relaxation: a simulation study.

7 January 2021

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Multiscale modeling of calcium signaling in the cardiac dyad.

7 January 2021

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Multi-scale models of local control of calcium induced calcium release.

7 January 2021

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An integrated model of cardiac mitochondrial energy metabolism and calcium dynamics

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Building the power house: recent advances in mitochondrial studies through proteomics and systems biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Mechanistic systems models of cell signaling networks: a case study of myocyte adrenergic regulation.

7 January 2021

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Modeling beta-adrenergic control of cardiac myocyte contractility in silico

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Modeling regulation of cardiac KATP and L-type Ca2+ currents by ATP, ADP, and Mg2+

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Systems analysis of PKA-mediated phosphorylation gradients in live cardiac myocytes

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

A computational model integrating electrophysiology, contraction, and mitochondrial bioenergetics in the ventricular myocyte

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Using models of the myocyte for functional interpretation of cardiac proteomic data

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Beyond standardization: dynamic software infrastructures for systems biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

The Gaggle: an open-source software system for integrating bioinformatics software and data sources

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

BioSPICE: A Computational Infrastructure for Integrative Biology

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Representing, storing and accessing molecular interaction data: a review of models and tools

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

LabHEART: an interactive computer model of rabbit ventricular myocyte ion channels and Ca transport

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

simBio: a Java package for the development of detailed cell models

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

Computational modeling of cardiac ventricular action potentials in rat and mouse: review

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YJMCC.2007.12.005

10.1016/J.YJMCC.2007.12.005

7 January 2021

Identifiers

DOI

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18 August 2017

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