(Q37084281)

18 August 2017

High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5(T)). (English)

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18 August 2017

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15

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18 August 2017

23

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18 August 2017

27

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18 August 2017

31

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18 August 2017

3

Alla Lapidus

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Hans-Peter Klenk

30

Hans-Peter Klenk

0 references

Erko Stackebrandt

1

Erko Stackebrandt

0 references

Roxanne Tapia

8

Roxanne Tapia

0 references

Philip Hugenholtz

29

Philip Hugenholtz

0 references

Tanja Woyke

24

Tanja Woyke

0 references

Cliff Han

Cliff Han

6

0 references

Sam Pitluck

11

Sam Pitluck

1 reference

18 August 2017

28

Victor Markowitz

1 reference

18 August 2017

18

Amrita Pati

1 reference

18 August 2017

17

Marcel Huntemann

1 reference

18 August 2017

7

Jan-Fang Cheng

1 reference

18 August 2017

Konstantinos Mavromatis

13

Konstantinos Mavromatis

1 reference

18 August 2017

20

Krishna Palaniappan

1 reference

18 August 2017

4

Matt Nolan

1 reference

18 August 2017

5

Susan Lucas

1 reference

18 August 2017

19

Amy Chen

1 reference

18 August 2017

25

John C Detter

1 reference

18 August 2017

2

Olga Chertkov

1 reference

18 August 2017

21

Manfred Rohde

1 reference

18 August 2017

10

David Bruce

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18 August 2017

14

Ioanna Pagani

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18 August 2017

12

Konstantinos Liolios

1 reference

18 August 2017

26

James Bristow

1 reference

18 August 2017

9

Lynne A Goodwin

1 reference

18 August 2017

16

Natalia Mikhailova

1 reference

18 August 2017

22

Brian J Tindall

1 reference

18 August 2017

15 April 2013

1 reference

Standards in genomic sciences

18 August 2017

1 reference

18 August 2017

8

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18 August 2017

1

1 reference

18 August 2017

37-46

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https://scigraph.springernature.com/pub.10.4056/sigs.3537045

18 August 2017

0 references

cites work

The DNA bank network: the start from a german initiative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1(T)).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of Cellulophaga lytica type strain (LIM-21).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of Weeksella virosa type strain (9751).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845).

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Joostella atrarenae sp. nov., a novel member of the Flavobacteriaceae originating from the black sea sand of Jeju Island

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

En route to a genome-based classification of Archaea and Bacteria?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Prodigal: prokaryotic gene recognition and translation initiation site identification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

IMG ER: a system for microbial genome annotation expert review and curation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

A rapid bootstrap algorithm for the RAxML Web servers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Joostella marina gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from the East Sea.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

The minimum information about a genome sequence (MIGS) specification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Chryseobacterium ureilyticum sp. nov., Chryseobacterium gambrini sp. nov., Chryseobacterium pallidum sp. nov. and Chryseobacterium molle sp. nov., isolated from beer-bottling plants

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Galbibacter mesophilus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Zhouia amylolytica gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from sediment of the South China Sea.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, ...

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Multiple sequence alignment using partial order graphs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Gene ontology: tool for the unification of biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Basic local alignment search tool

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Complete genome sequence of Robiginitalea biformata HTCC2501.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

How many bootstrap replicates are necessary?

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739173

Cutting a Gordian Knot: Emended Classification and Description of the Genus Flavobacterium, Emended Description of the Family Flavobacteriaceae, and Proposal of Flavobacterium hydatis nom. nov. (Basonym, Cytophaga aquatilis Strohl and Tait 1978)

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.4056%2FSIGS.3537045

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845T)

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.4056%2FSIGS.3537045

21 January 2018

Identifiers

DOI

10.4056/SIGS.3537045

1 reference

Dimensions Publication ID

18 August 2017

0 references

1 reference

18 August 2017

PubMed publication ID

23961310

1 reference