(Q37084297)

18 August 2017

Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437(T)). (English)

1 reference

18 August 2017

0 references

Alistipes finegoldii

1 reference

based on heuristic

inferred from title

whole genome sequencing

1 reference

1 reference

15

1 reference

18 August 2017

21

1 reference

18 August 2017

25

1 reference

18 August 2017

28

1 reference

18 August 2017

31

1 reference

18 August 2017

4

Alla Lapidus

0 references

Hans-Peter Klenk

32

Hans-Peter Klenk

0 references

Erko Stackebrandt

2

Erko Stackebrandt

0 references

Roxanne Tapia

10

Roxanne Tapia

0 references

Philip Hugenholtz

30

Philip Hugenholtz

0 references

Tanja Woyke

33

Tanja Woyke

0 references

Sam Pitluck

12

Sam Pitluck

1 reference

18 August 2017

29

Victor Markowitz

1 reference

18 August 2017

18

Amrita Pati

1 reference

18 August 2017

17

Marcel Huntemann

1 reference

18 August 2017

9

Jan-Fang Cheng

1 reference

18 August 2017

Konstantinos Mavromatis

1

Konstantinos Mavromatis

1 reference

18 August 2017

22

Loren Hauser

1 reference

18 August 2017

20

Krishna Palaniappan

1 reference

18 August 2017

5

Matt Nolan

1 reference

18 August 2017

6

Susan Lucas

1 reference

18 August 2017

19

Amy Chen

1 reference

18 August 2017

26

John C Detter

1 reference

18 August 2017

23

Manfred Rohde

1 reference

18 August 2017

7

Nancy Hammon

1 reference

18 August 2017

14

Ioanna Pagani

1 reference

18 August 2017

8

Shweta Deshpande

1 reference

18 August 2017

13

Konstantinos Liolios

1 reference

18 August 2017

24

Sabine Gronow

1 reference

18 August 2017

27

James Bristow

1 reference

18 August 2017

11

Lynne A Goodwin

1 reference

18 August 2017

16

Natalia Mikhailova

1 reference

18 August 2017

Christine Munk

3

1 reference

18 August 2017

15 April 2013

1 reference

Standards in genomic sciences

18 August 2017

1 reference

18 August 2017

8

1 reference

18 August 2017

1

1 reference

18 August 2017

26-36

1 reference

https://scigraph.springernature.com/pub.10.4056/sigs.3527032

18 August 2017

0 references

cites work

The DNA bank network: the start from a german initiative

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Genome sequence and description of Alistipes senegalensis sp. nov

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

The fast changing landscape of sequencing technologies and their impact on microbial genome assemblies and annotation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Identification and characterization of potential performance-related gut microbiotas in broiler chickens across various feeding trials

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Release LTPs104 of the All-Species Living Tree

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

En route to a genome-based classification of Archaea and Bacteria?

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Prodigal: prokaryotic gene recognition and translation initiation site identification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

IMG ER: a system for microbial genome annotation expert review and curation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

A rapid bootstrap algorithm for the RAxML Web servers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

The minimum information about a genome sequence (MIGS) specification

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Alistipes onderdonkii sp. nov. and Alistipes shahii sp. nov., of human origin

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Validation of publication of new names and new combinations previously effectively published outside the IJSEM.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Reclassification of Bacteroides putredinis (Weinberg et al., 1937) in a new genus Alistipes gen. nov., as Alistipes putredinis comb. nov., and description of Alistipes finegoldii sp. nov., from human sources

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Multiple sequence alignment using partial order graphs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Gene ontology: tool for the unification of biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Basic local alignment search tool

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Alistipes finegoldii in blood cultures from colon cancer patients

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3739176

Bacteriology of histopathologically defined appendicitis in children

3 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23961309

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characteristics of an unusual anaerobic pigmented gram-negative rod isolated from normal and inflamed appendices

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23961309

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.4056/SIGS.3527032

1 reference

Dimensions Publication ID

18 August 2017

0 references

1 reference

18 August 2017

PubMed publication ID

23961309

1 reference