(Q37205415)

18 August 2017

Epigenomic analysis of multilineage differentiation of human embryonic stem cells (English)

1 reference

human embryonic stem cell

18 August 2017

1 reference

Pengzhi Yu

23

0 references

Pradipta R Ray

Pradipta Ray

6

0 references

Kran Suknuntha

Kran Suknuntha

24

0 references

Lee E Edsall

Lee E Edsall

27

0 references

Ryan Lister

Ryan Lister

3

0 references

John W Whitaker

7

John W Whitaker

1 reference

18 August 2017

39

Wei Wang

1 reference

18 August 2017

Wei Xie

1

1 reference

18 August 2017

Matthew D Schultz

2

1 reference

18 August 2017

Zhonggang Hou

4

1 reference

18 August 2017

Nisha Rajagopal

5

1 reference

18 August 2017

Shulan Tian

8

1 reference

18 August 2017

R David Hawkins

9

1 reference

18 August 2017

Danny Leung

10

1 reference

18 August 2017

Hongbo Yang

11

1 reference

18 August 2017

Tao Wang

12

1 reference

18 August 2017

Ah Young Lee

13

1 reference

18 August 2017

Scott A Swanson

14

1 reference

18 August 2017

Jiuchun Zhang

15

1 reference

18 August 2017

Yun Zhu

16

1 reference

18 August 2017

Audrey Kim

17

1 reference

18 August 2017

Joseph R Nery

18

1 reference

18 August 2017

Mark A Urich

19

1 reference

18 August 2017

Samantha Kuan

20

1 reference

18 August 2017

Chia-an Yen

21

1 reference

18 August 2017

Sarit Klugman

22

1 reference

18 August 2017

Nicholas E Propson

25

1 reference

18 August 2017

Huaming Chen

26

1 reference

18 August 2017

Ulrich Wagner

28

1 reference

18 August 2017

Yan Li

29

1 reference

18 August 2017

Zhen Ye

30

1 reference

18 August 2017

Ashwinikumar Kulkarni

31

1 reference

18 August 2017

Zhenyu Xuan

32

1 reference

18 August 2017

Wen-Yu Chung

33

1 reference

18 August 2017

Neil C Chi

34

1 reference

18 August 2017

Jessica E Antosiewicz-Bourget

35

1 reference

18 August 2017

Igor Slukvin

36

1 reference

18 August 2017

Ron Stewart

37

1 reference

18 August 2017

Michael Q Zhang

38

1 reference

18 August 2017

James A Thomson

40

1 reference

18 August 2017

Joseph R Ecker

41

1 reference

18 August 2017

Bing Ren

42

1 reference

18 August 2017

language of work or name

English

0 references

publication date

9 May 2013

1 reference

18 August 2017

1 reference

18 August 2017

153

1 reference

18 August 2017

5

1 reference

18 August 2017

1134-1148

1 reference

RFECS: a random-forest based algorithm for enhancer identification from chromatin state

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Genome-wide chromatin state transitions associated with developmental and environmental cues

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

A temporal chromatin signature in human embryonic stem cells identifies regulators of cardiac development

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Bivalent histone modifications in early embryogenesis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Identification of human housekeeping genes and tissue-selective genes by microarray meta-analysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

BRACHYURY and CDX2 mediate BMP-induced differentiation of human and mouse pluripotent stem cells into embryonic and extraembryonic lineages

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Chemically defined conditions for human iPSC derivation and culture

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Mapping and analysis of chromatin state dynamics in nine human cell types

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Control of the embryonic stem cell state

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Enhancer function: new insights into the regulation of tissue-specific gene expression

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

GC-rich sequence elements recruit PRC2 in mammalian ES cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

A unique chromatin signature uncovers early developmental enhancers in humans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

A mesoderm-derived precursor for mesenchymal stem and endothelial cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Histone H3K27ac separates active from poised enhancers and predicts developmental state

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

The DNA methylome of human peripheral blood mononuclear cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Distinct epigenomic landscapes of pluripotent and lineage-committed human cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Conservation and divergence of methylation patterning in plants and animals

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Dynamic changes in the human methylome during differentiation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Polycomb group proteins: navigators of lineage pathways led astray in cancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Human DNA methylomes at base resolution show widespread epigenomic differences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Linking DNA methylation and histone modification: patterns and paradigms

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

On the nature of human housekeeping genes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Genome-scale DNA methylation maps of pluripotent and differentiated cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Chromatin modifications and their function

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Control of developmental regulators by Polycomb in human embryonic stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Polycomb complexes repress developmental regulators in murine embryonic stem cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Promoter features related to tissue specificity as measured by Shannon entropy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Human embryonic stem cells express a unique set of microRNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

DNA methylation patterns and epigenetic memory

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Embryonic stem cell lines derived from human blastocysts

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Gene dosage-dependent embryonic development and proliferation defects in mice lacking the transcriptional integrator p300

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Distinctive chromatin in human sperm packages genes for embryo development

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Severe global DNA hypomethylation blocks differentiation and induces histone hyperacetylation in embryonic stem cells.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

FGF2 sustains NANOG and switches the outcome of BMP4-induced human embryonic stem cell differentiation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

A species-generalized probabilistic model-based definition of CpG islands

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Maintenance of self-renewal ability of mouse embryonic stem cells in the absence of DNA methyltransferases Dnmt1, Dnmt3a and Dnmt3b

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

DNA methylation dynamics during in vivo differentiation of blood and skin stem cells

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Silencing of endogenous retroviruses: when and why do histone marks predominate?

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

DNA-binding factors shape the mouse methylome at distal regulatory regions

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Transposable elements have rewired the core regulatory network of human embryonic stem cells

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3786220

BMP4 initiates human embryonic stem cell differentiation to trophoblast

3 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23664764

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2013.04.022

1 reference

18 August 2017

1 reference

18 August 2017

1 reference