(Q37273168)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19433618%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

title

Immunoglobulin switch mu sequence causes RNA polymerase II accumulation and reduces dA hypermutation (English)

1 reference

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27 January 2020

2

1 reference

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27 January 2020

Ahmed Amine Khamlichi

5

1 reference

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27 January 2020

author name string

Deepa Rajagopal

1

1 reference

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27 January 2020

Amalendu Ghosh

3

1 reference

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27 January 2020

Tirtha Chakraborty

4

1 reference

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27 January 2020

Ranjan Sen

6

1 reference

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27 January 2020

Patricia J Gearhart

7

1 reference

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27 January 2020

language of work or name

English

0 references

publication date

11 May 2009

1 reference

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Journal of Experimental Medicine

27 January 2020

published in

1 reference

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27 January 2020

volume

206

1 reference

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27 January 2020

issue

6

1 reference

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27 January 2020

page(s)

1237-1244

1 reference

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describes a project that uses

27 January 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2715057/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Transcriptional pausing and stalling causes multiple clustered mutations by human activation-induced deaminase

1 reference

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Interaction between antibody-diversification enzyme AID and spliceosome-associated factor CTNNBL1

6 September 2017

1 reference

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Mechanism and regulation of class switch recombination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Antisense transcripts from immunoglobulin heavy-chain locus V(D)J and switch regions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

APE1- and APE2-dependent DNA breaks in immunoglobulin class switch recombination.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Sequence dependence of chromosomal R-loops at the immunoglobulin heavy-chain Smu class switch region

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Different mutation signatures in DNA polymerase eta- and MSH6-deficient mice suggest separate roles in antibody diversification

6 September 2017

1 reference

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Control of gene expression during T cell activation: alternate regulation of mRNA transcription and mRNA stability

6 September 2017

1 reference

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MSH2-MSH6 stimulates DNA polymerase eta, suggesting a role for A:T mutations in antibody genes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Activation-induced cytidine deaminase (AID) can target both DNA strands when the DNA is supercoiled

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

A role for Msh6 but not Msh3 in somatic hypermutation and class switch recombination

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Absence of DNA polymerase eta reveals targeting of C mutations on the nontranscribed strand in immunoglobulin switch regions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

H2AX is required for recombination between immunoglobulin switch regions but not for intra-switch region recombination or somatic hypermutation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

G4-forming sequences in the non-transcribed DNA strand pose blocks to T7 RNA polymerase and mammalian RNA polymerase II.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

The in vivo pattern of AID targeting to immunoglobulin switch regions deduced from mutation spectra in msh2-/- ung-/- mice

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Immunoglobulin isotype switching is inhibited and somatic hypermutation perturbed in UNG-deficient mice

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Expression of I mu-C gamma hybrid germline transcripts subsequent to immunoglobulin heavy chain class switching

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

C mu-containing transcripts initiate heterogeneously within the IgH enhancer region and contain a novel 5'-nontranslatable exon

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

DNA polymerase eta contributes to strand bias of mutations of A versus T in immunoglobulin genes

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

An evolutionarily conserved target motif for immunoglobulin class-switch recombination

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Immunoglobulin class-switch recombination in mice devoid of any S mu tandem repeat.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Transcription-coupled events associating with immunoglobulin switch region chromatin

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Role of antigen receptor affinity in T cell-independent antibody responses in vivo

3 September 2018

1 reference

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Activation-induced deaminase (AID)-directed hypermutation in the immunoglobulin Smu region: implication of AID involvement in a common step of class switch recombination and somatic hypermutation

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2715057

Somatic hypermutation of immunoglobulin genes is linked to transcription initiation

3 September 2018

1 reference

12 December 2020

Impairment of transcription elongation by R-loops in vitro

1 reference

12 December 2020

Strand-biased spreading of mutations during somatic hypermutation

1 reference

12 December 2020

Repeat organization and epigenetic regulation of the DH-Cmu domain of the immunoglobulin heavy-chain gene locus

1 reference

12 December 2020

Identifiers

DOI

10.1084/JEM.20082514

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19433618%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19433618%20AND%20SRC:MED&resulttype=core&format=json

27 January 2020

PubMed publication ID

19433618

1 reference