(Q37274183)

19 August 2017

Energy dependence of HCD on peptide fragmentation: stepped collisional energy finds the sweet spot (English)

1 reference

19 August 2017

Jolene K Diedrich

1

1 reference

19 August 2017

Antonio F M Pinto

series ordinal

2

1 reference

19 August 2017

John R Yates

series ordinal

3

1 reference

19 August 2017

21 August 2013

1 reference

Journal of the American Society for Mass Spectrometry

19 August 2017

1 reference

19 August 2017

24

1 reference

19 August 2017

11

1 reference

19 August 2017

1690-1699

1 reference

https://scigraph.springernature.com/pub.10.1007/s13361-013-0709-7

19 August 2017

0 references

cites work

Low-mass ions produced from peptides by high-energy collision-induced dissociation in tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Evaluation of HCD- and CID-type fragmentation within their respective detection platforms for murine phosphoproteomics.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Improving SRM assay development: a global comparison between triple quadrupole, ion trap, and higher energy CID peptide fragmentation spectra.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

The mechanisms of collisional activation of ions in mass spectrometry

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Predicting intensity ranks of peptide fragment ions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

A simulated MS/MS library for spectrum-to-spectrum searching in large scale identification of proteins

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Higher-energy C-trap dissociation for peptide modification analysis.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Use of an integrated MS--multiplexed MS/MS data acquisition strategy for high-coverage peptide mapping studies

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

MS1, MS2, and SQT-three unified, compact, and easily parsed file formats for the storage of shotgun proteomic spectra and identifications.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Statistical analysis of mass spectral data obtained from singly protonated peptides under high-energy collision-induced dissociation conditions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Protein sequencing by tandem mass spectrometry

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Improved peptide identification by targeted fragmentation using CID, HCD and ETD on an LTQ-Orbitrap Velos.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

A systematic investigation into the nature of tryptic HCD spectra

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Feasibility of large-scale phosphoproteomics with higher energy collisional dissociation fragmentation.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Detection of tyrosine phosphorylated peptides by precursor ion scanning quadrupole TOF mass spectrometry in positive ion mode

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Formation of a2+ ions of protonated peptides. An ab initio study.

3 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3815594

Species identification and vitamin A level in lutjanid fish implicated in vitamin A poisoning

3 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS13361-013-0709-7

Collision-induced fragmentation of (M + H)+ ions of peptides. Side chain specific sequence ions

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS13361-013-0709-7

The structure and fragmentation of B n (n≥3) ions in peptide spectra

21 January 2018

1 reference

12 December 2020

An experimental approach to enhance precursor ion fragmentation for metabolite identification studies: application of dual collision cells in an orbital trap

1 reference

12 December 2020

Novel fragmentation process of peptides by collision-induced decomposition in a tandem mass spectrometer: differentiation of leucine and isoleucine

1 reference

12 December 2020

Role of the site of protonation in the low-energy decompositions of gas-phase peptide ions

1 reference

12 December 2020

Sequencing of peptides by tandem mass spectrometry and high-energy collision-induced dissociation

1 reference

12 December 2020

Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags

1 reference

12 December 2020

10.1007/S13361-013-0709-7

Identifiers

DOI

1 reference

19 August 2017

1 reference

19 August 2017

PubMed publication ID

23963813

1 reference