(Q35736596)

English

Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information

scientific article published on December 2011

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Improving collision induced dissociation (CID), high energy collision dissociation (HCD), and electron transfer dissociation (ETD) fourier transform MS/MS degradome-peptidome identifications using high accuracy mass information (English)

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Samuel Owen Purvine

object named as

Samuel O Purvine

3

0 references

Richard D. Smith

object named as

Richard D Smith

4

0 references

author name string

Yufeng Shen

1

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Nikola Tolić

2

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

publication date

1 December 2011

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Journal of Proteome Research

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

668-677

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Blood peptidome-degradome profile of breast cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Deconvolution and database search of complex tandem mass spectra of intact proteins: a combinatorial approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Strategy for degradomic-peptidomic analysis of human blood plasma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

YADA: a tool for taking the most out of high-resolution spectra.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Sensitive and specific identification of wild type and variant proteins from 8 to 669 kDa using top-down mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Mass spectrometry analysis of proteome-wide proteolytic post-translational degradation of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Analysis and validation of proteomic data generated by tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

New and automated MSn approaches for top-down identification of modified proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Protease degradomics: a new challenge for proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

27 July 2018

Effectiveness of CID, HCD, and ETD with FT MS/MS for degradomic-peptidomic analysis: comparison of peptide identification methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

An integrated LC-ESI-MS platform for quantitation of serum peptide ladders. Application for colon carcinoma study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

H-score, a mass accuracy driven rescoring approach for improved peptide identification in modification rich samples.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

Proteome-wide identification of proteins and their modifications with decreased ambiguities and improved false discovery rates using unique sequence tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

ProSight PTM 2.0: improved protein identification and characterization for top down mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272082

25 September 2018

Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags

1 reference

https://pubmed.ncbi.nlm.nih.gov/22054047

12 December 2020

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Identifiers

10.1021/PR200597J

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

ResearchGate publication ID

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