(Q35006588)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

The generating function of CID, ETD, and CID/ETD pairs of tandem mass spectra: applications to database search (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

0 references

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Albert J.R. Heck

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

8

Pavel A Pevzner

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

3

Nuno Bandeira

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

author name string

Sangtae Kim

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Nikolai Mischerikow

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

J Daniel Navarro

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Louis Wich

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

publication date

9 September 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

Molecular & Cellular Proteomics

13 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

issue

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

2840-2852

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

13 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Gapped spectral dictionaries and their applications for database searches of tandem mass spectra

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Phosphopeptide fragmentation and analysis by mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Identification of protein O-GlcNAcylation sites using electron transfer dissociation mass spectrometry on native peptides

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Electron transfer dissociation in conjunction with collision activation to investigate the Drosophila melanogaster phosphoproteome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Collisions or electrons? Protein sequence analysis in the 21st century

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Post-acquisition ETD spectral processing for increased peptide identifications

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

A new probabilistic database search algorithm for ETD spectra

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Accurate and sensitive peptide identification with Mascot Percolator

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Straightforward and de novo peptide sequencing by MALDI-MS/MS using a Lys-N metalloendopeptidase.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Decision tree-driven tandem mass spectrometry for shotgun proteomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Strong cation exchange-based fractionation of Lys-N-generated peptides facilitates the targeted analysis of post-translational modifications

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Spectral dictionaries: Integrating de novo peptide sequencing with database search of tandem mass spectra

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Comprehensive comparison of collision induced dissociation and electron transfer dissociation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Electron capture/transfer versus collisionally activated/induced dissociations: solo or duet?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Straightforward ladder sequencing of peptides using a Lys-N metalloendopeptidase.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Assigning significance to peptides identified by tandem mass spectrometry using decoy databases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Long-distance combinatorial linkage between methylation and acetylation on histone H3 N termini

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Proteomics-grade de novo sequencing approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Open mass spectrometry search algorithm

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

The role of electron capture dissociation in biomolecular analysis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

TANDEM: matching proteins with tandem mass spectra

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Probability-based protein identification by searching sequence databases using mass spectrometry data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

De novo peptide sequencing via tandem mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101864

Electron Capture Dissociation of Multiply Charged Protein Cations. A Nonergodic Process

8 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Improved identification of endogenous peptides from murine nervous tissue by multiplexed peptide extraction methods and multiplexed mass spectrometric analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Multiplexed proteomics mapping of yeast RNA polymerase II and III allows near-complete sequence coverage and reveals several novel phosphorylation sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Spectrum fusion: using multiple mass spectra for de novo Peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Mutation-tolerant protein identification by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Multi-spectra peptide sequencing and its applications to multistage mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

Semi-supervised learning for peptide identification from shotgun proteomics datasets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FMCP.M110.003731

New prospects for proteomics--electron-capture (ECD) and electron-transfer dissociation (ETD) fragmentation techniques and combined fractional diagonal chromatography (COFRADIC)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20829449

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/MCP.M110.003731

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20829449%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PubMed publication ID

20829449

1 reference