(Q42647139)

4 November 2017

Multi-spectra peptide sequencing and its applications to multistage mass spectrometry (English)

1 reference

4 November 2017

2

1 reference

4 November 2017

4

Matthias Mann

1 reference

4 November 2017

5

Pavel A Pevzner

1 reference

4 November 2017

1

Nuno Bandeira

1 reference

4 November 2017

Jesper V Mann

3

1 reference

PMC publication ID

2718660

4 November 2017

language of work or name

English

0 references

publication date

1 July 2008

1 reference

4 November 2017

1 reference

4 November 2017

24

1 reference

4 November 2017

13

1 reference

4 November 2017

i416-23

1 reference

Investigating MS2/MS3 matching statistics: a model for coupling consecutive stage mass spectrometry data for increased peptide identification confidence

4 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

MSNovo: a dynamic programming algorithm for de novo peptide sequencing via tandem mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Shotgun protein sequencing: assembly of peptide tandem mass spectra from mixtures of modified proteins.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Novel peptide identification from tandem mass spectra using ESTs and sequence database compression

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Protein identification by spectral networks analysis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

The diversity of bioactive proteins in Australian snake venoms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Improving gene annotation using peptide mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Recombinant polyclonal antibodies: the next generation of antibody therapeutics?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

De novo proteomic sequencing of a monoclonal antibody raised against OX40 ligand.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Identification of post-translational modifications by blind search of mass spectra.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Immunoglobulin gene diversification

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

NovoHMM: a hidden Markov model for de novo peptide sequencing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Robust accurate identification of peptides (RAId): deciphering MS2 data using a structured library search with de novo based statistics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Small peptides, big world: biotechnological potential in neglected bioactive peptides from arthropod venoms

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

PepNovo: de novo peptide sequencing via probabilistic network modeling

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Improved peptide identification in proteomics by two consecutive stages of mass spectrometric fragmentation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Mass spectrometry-based proteomics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Detection of secreted peptides by using hypothesis-driven multistage mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

De novo peptide sequencing by two-dimensional fragment correlation mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Probability-based protein identification by searching sequence databases using mass spectrometry data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

De novo peptide sequencing via tandem mass spectrometry

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Rapid 'de novo' peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

A computer program to aid the sequencing of peptides in collision-activated decomposition experiments.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Performance evaluation of existing de novo sequencing algorithms.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

Shotgun protein sequencing by tandem mass spectra assembly

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2718660

C-terminal peptide sequencing via multistage mass spectrometry

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18785330

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fast algorithm for peptide sequencing by mass spectroscopy

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18785330

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18785330

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTN184

1 reference

4 November 2017

conf/ismb/BandeiraOMP08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

2718660

4 November 2017

PubMed publication ID

18785330

1 reference

PMC publication ID

2718660