(Q37318249)

19 August 2017

Evaluation of six methods for estimating synonymous and nonsynonymous substitution rates (English)

1 reference

19 August 2017

Zhang Zhang

1

1 reference

PMC publication ID

5054070

19 August 2017

Jun Yu

series ordinal

2

1 reference

19 August 2017

1 August 2006

1 reference

Genomics Proteomics and Bioinformatics

19 August 2017

1 reference

19 August 2017

4

1 reference

19 August 2017

3

1 reference

19 August 2017

173-181

1 reference

Computing Ka and Ks with a consideration of unequal transitional substitutions

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

An integrated view of protein evolution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

The Genomes of Oryza sativa: a history of duplications

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Model selection and model averaging in phylogenetics: advantages of akaike information criterion and bayesian approaches over likelihood ratio tests

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

The Ka/Ks ratio: diagnosing the form of sequence evolution

6 September 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

6 September 2017

https://api.crossref.org/works/10.1016%2FS1672-0229%2806%2960030-2

7 January 2021

inferred from DOI database lookup

The K(A)/K(S) ratio test for assessing the protein-coding potential of genomic regions: an empirical and simulation study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Statistical methods for detecting molecular adaptation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Models of molecular evolution and phylogeny

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Synonymous and nonsynonymous rate variation in nuclear genes of mammals.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

PAML: a program package for phylogenetic analysis by maximum likelihood

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

A method for estimating the numbers of synonymous and nonsynonymous substitutions per site

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Evolution of the Zfx and Zfy genes: rates and interdependence between the genes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Unbiased estimation of the rates of synonymous and nonsynonymous substitution

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

A codon-based model of nucleotide substitution for protein-coding DNA sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

A likelihood approach for comparing synonymous and nonsynonymous nucleotide substitution rates, with application to the chloroplast genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

New methods for estimating the numbers of synonymous and nonsynonymous substitutions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Episodic adaptive evolution of primate lysozymes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5054070

Estimating synonymous and nonsynonymous substitution rates

26 June 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17127215

12 December 2020

inferred from PubMed ID database lookup

Comparison of Three Methods for Estimating Rates of Synonymous and Nonsynonymous Nucleotide Substitutions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17127215

12 December 2020

inferred from PubMed ID database lookup

Models of Molecular Evolution and Phylogeny: Table 1

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FS1672-0229%2806%2960030-2

7 January 2021

inferred from DOI database lookup

Model Selection in Phylogenetics

1 reference

Crossref

https://api.crossref.org/works/10.1016%2FS1672-0229%2806%2960030-2

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1016/S1672-0229(06)60030-2

1 reference

19 August 2017

journals/gpb/ZhangY06

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PMC publication ID

5054070

19 August 2017

PubMed publication ID

17127215

1 reference

PMC publication ID

5054070