(Q37330917)

English

Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression

scientific article published on 04 August 2009

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

Genome-wide analysis of the auxin-responsive transcriptome downstream of iaa1 and its expression analysis reveal the diversity and complexity of auxin-regulated gene expression (English)

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

0 references

author name string

Dong Ju Lee

1

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

Jong Wha Park

2

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

Han Woo Lee

3

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

Jungmook Kim

4

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

publication date

4 August 2009

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

Journal of Experimental Botany

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

60

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

13

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

3935-3957

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

The Generalization of `Student's' Problem when Several Different Population Variances are Involved

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Multilevel interactions between ethylene and auxin in Arabidopsis roots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Mechanism of auxin perception by the TIR1 ubiquitin ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin receptors: a new role for F-box proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Patterns of auxin transport and gene expression during primordium development revealed by live imaging of the Arabidopsis inflorescence meristem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

The Arabidopsis F-box protein TIR1 is an auxin receptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

The F-box protein TIR1 is an auxin receptor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Developmental specificity of auxin response by pairs of ARF and Aux/IAA transcriptional regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin: regulation, action, and interaction.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin signals--turning genes on and turning cells around.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

The auxin-induced transcriptome for etiolated Arabidopsis seedlings using a structure/function approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

The roles of auxin response factor domains in auxin-responsive transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Prediction of plant microRNA targets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Rapid degradation of auxin/indoleacetic acid proteins requires conserved amino acids of domain II and is proteasome dependent

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Auxin modulates the degradation rate of Aux/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Activation and repression of transcription by auxin-response factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

ETTIN patterns the Arabidopsis floral meristem and reproductive organs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Protein-protein interactions among the Aux/IAA proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

ARF1, a transcription factor that binds to auxin response elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

6 September 2017

Allosteric effects of Pit-1 DNA sites on long-term repression in cell type specification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

28 September 2017

Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

Disruption and overexpression of auxin response factor 8 gene of Arabidopsis affect hypocotyl elongation and root growth habit, indicating its possible involvement in auxin homeostasis in light condition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

Overlapping and non-redundant functions of the Arabidopsis auxin response factors MONOPTEROS and NONPHOTOTROPIC HYPOCOTYL 4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

Aux/IAA proteins contain a potent transcriptional repression domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

Degradation of Aux/IAA proteins is essential for normal auxin signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

Arabidopsis gynoecium structure in the wild and in ettin mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

26 June 2018

The HECATE genes regulate female reproductive tract development in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The auxin-regulated AP2/EREBP gene PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Specificity and similarity of functions of the Aux/IAA genes in auxin signaling of Arabidopsis revealed by promoter-exchange experiments among MSG2/IAA19, AXR2/IAA7, and SLR/IAA14.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

AUXIN RESPONSE FACTOR8 is a negative regulator of fruit initiation in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Overexpression of PRE1 and its homologous genes activates Gibberellin-dependent responses in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

A role for auxin response factor 19 in auxin and ethylene signaling in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

AUXIN RESPONSE FACTOR1 and AUXIN RESPONSE FACTOR2 regulate senescence and floral organ abscission in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

NPH4/ARF7 and ARF19 promote leaf expansion and auxin-induced lateral root formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

AUXIN RESPONSE FACTOR 2 (ARF2): a pleiotropic developmental regulator.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Functional genomic analysis of the AUXIN RESPONSE FACTOR gene family members in Arabidopsis thaliana: unique and overlapping functions of ARF7 and ARF19.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The IAA1 protein is encoded by AXR5 and is a substrate of SCF(TIR1).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Development and evaluation of an Arabidopsis whole genome Affymetrix probe array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

AXR3 and SHY2 interact to regulate root hair development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The HAT2 gene, a member of the HD-Zip gene family, isolated as an auxin inducible gene by DNA microarray screening, affects auxin response in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Mutation in domain II of IAA1 confers diverse auxin-related phenotypes and represses auxin-activated expression of Aux/IAA genes in steroid regulator-inducible system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Arabidopsis SHY2/IAA3 inhibits auxin-regulated gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Characterization of the response of the Arabidopsis response regulator gene family to cytokinin.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Dimerization and DNA binding of auxin response factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Mutations in the AXR3 gene of Arabidopsis result in altered auxin response including ectopic expression from the SAUR-AC1 promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2736900

2 September 2018

Auxin signaling

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The NPH4 locus encodes the auxin response factor ARF7, a conditional regulator of differential growth in aerial Arabidopsis tissue

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription factors: bound to activate or repress

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxin

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ARF7 and ARF19 regulate lateral root formation via direct activation of LBD/ASL genes in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Arabidopsis transcription factor MYB77 modulates auxin signal transduction

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Convergence of signaling pathways in the control of differential cell growth in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epidermal cell fate determination in Arabidopsis: patterns defined by a steroid-inducible regulator

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Composite structure of auxin response elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional regulation of PS-IAA4/5 and PS-IAA6 early gene expression by indoleacetic acid and protein synthesis inhibitors in pea (Pisum sativum)

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Aux/IAA proteins repress expression of reporter genes containing natural and highly active synthetic auxin response elements

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant development is regulated by a family of auxin receptor F box proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/19654206

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/JXB/ERP230

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 August 2017

ResearchGate publication ID

0 references

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