(Q37410173)

20 August 2017

Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis (English)

1 reference

Flavobacterium johnsoniae

20 August 2017

1 reference

Flavobacterium johnsoniae

2 references

4

Alla Lapidus

0 references

Gary Xie

Gary Xie

2

0 references

Mark J McBride

Mark J McBride

1

0 references

Timothy R. Hoover

Timothy R Hoover

12

0 references

Bernard Henrissat

5

Bernard Henrissat

1 reference

20 August 2017

Eric C Martens

3

1 reference

20 August 2017

Ryan G Rhodes

6

1 reference

20 August 2017

Eugene Goltsman

7

1 reference

20 August 2017

Wei Wang

8

1 reference

20 August 2017

Jian Xu

9

1 reference

20 August 2017

David W Hunnicutt

10

1 reference

20 August 2017

Andrew M Staroscik

11

1 reference

20 August 2017

Yi-Qiang Cheng

13

1 reference

20 August 2017

Jennifer L Stein

14

1 reference

20 August 2017

language of work or name

English

0 references

publication date

28 August 2009

1 reference

full work available at URL

20 August 2017

https://europepmc.org/articles/pmc2772454?pdf=render

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1128/aem.01495-09?email=unpaywall_01@example.com

published in

Applied and Environmental Microbiology

1 reference

20 August 2017

75

1 reference

20 August 2017

21

1 reference

20 August 2017

6864-6875

1 reference

https://api.unpaywall.org/v2/10.1128/aem.01495-09?email=unpaywall_01@example.com

20 August 2017

1 reference

19 March 2024

access restriction status

open access

1 reference

inferred from online access status

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Whole genome analysis of the marine Bacteroidetes'Gramella forsetii' reveals adaptations to degradation of polymeric organic matter

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Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus

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Peptidoglycan from Bacillus cereus mediates commensalism with rhizosphere bacteria from the Cytophaga-Flavobacterium group

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The integrated microbial genomes (IMG) system

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Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment

9 September 2017

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9 September 2017

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Genome-wide analysis of transcriptional hierarchy and feedback regulation in the flagellar system of Helicobacter pylori

9 September 2017

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GldI is a lipoprotein that is required for Flavobacterium johnsoniae gliding motility and chitin utilization

9 September 2017

1 reference

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Flavobacterium johnsoniae GldH is a lipoprotein that is required for gliding motility and chitin utilization

9 September 2017

1 reference

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Prediction of lipoprotein signal peptides in Gram-negative bacteria

9 September 2017

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A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis

9 September 2017

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2,5-dialkylresorcinol biosynthesis in Pseudomonas aurantiaca: novel head-to-head condensation of two fatty acid-derived precursors

9 September 2017

1 reference

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Common extracellular sensory domains in transmembrane receptors for diverse signal transduction pathways in bacteria and archaea

9 September 2017

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Type IV pili and twitching motility

9 September 2017

1 reference

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Mutations in Flavobacterium johnsoniae gldF and gldG disrupt gliding motility and interfere with membrane localization of GldA.

9 September 2017

1 reference

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Role of RgpA, RgpB, and Kgp proteinases in virulence of Porphyromonas gingivalis W50 in a murine lesion model

9 September 2017

1 reference

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Bacterial gliding motility: multiple mechanisms for cell movement over surfaces.

9 September 2017

1 reference

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Bacterial flagella and type III secretion systems

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Cloning and characterization of the Flavobacterium johnsoniae gliding motility genes gldD and gldE.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Purification and characterization of a psychrophilic, calcium-induced, growth-phase-dependent metalloprotease from the fish pathogen Flavobacterium psychrophilum

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Analysis of cepA and other Bacteroides fragilis genes reveals a unique promoter structure

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Native, industrial and fossil chitins

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Molecular cloning and characterization of murine and human N-acetylglucosamine kinase

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Cloning and characterization of the Flavobacterium johnsoniae gliding-motility genes gldB and gldC

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Improved microbial gene identification with GLIMMER

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

PAS domains: internal sensors of oxygen, redox potential, and light

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

A 55-kilodalton immunodominant antigen of Porphyromonas gingivalis W50 has arisen via horizontal gene transfer

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

SMART, a simple modular architecture research tool: identification of signaling domains

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

The GAF domain: an evolutionary link between diverse phototransducing proteins.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Cloning and characterization of the Flavobacterium johnsoniae (Cytophaga johnsonae) gliding motility gene, gldA

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Pfam: a comprehensive database of protein domain families based on seed alignments

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Characterization of four outer membrane proteins that play a role in utilization of starch by Bacteroides thetaiotaomicron

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Protein family classification based on searching a database of blocks

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Bees aren't the only ones: swarming in gram-negative bacteria

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Isolation and characterization of nonspreading mutants of the gliding bacterium Cytophaga johnsonae.

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Unusual sulfonolipids are characteristic of the Cytophaga-Flexibacter group

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Biochemical evidence that starch breakdown by Bacteroides thetaiotaomicron involves outer membrane starch-binding sites and periplasmic starch-degrading enzymes

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Characterization of four outer membrane proteins involved in binding starch to the cell surface of Bacteroides thetaiotaomicron

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Studies on Nonfruiting Myxobacteria: I. Cytophaga johnsonae, n.sp., a Chitin-decomposing Myxobacterium.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Location and characteristics of the transfer region of a Bacteroides conjugative transposon and regulation of transfer genes

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Structure of the gene encoding chitinase D of Bacillus circulans WL-12 and possible homology of the enzyme to other prokaryotic chitinases and class III plant chitinases

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

A novel serum chitinase that is expressed in bovine liver

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

An unusual primary sigma factor in the Bacteroidetes phylum.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Cloning and sequencing of the genes for N-acetylglucosamine use that construct divergent operons (nagE-nagAC) from Vibrio cholerae non-O1.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Studies on cell growth stimulating substances of low molecular weight. Part 3. Resorcinin, a mammalian cell growth stimulating substance produced by Cytophaga johnsonae.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Gene sequence, purification and characterization of N-acetyl-beta-glucosaminidase from a marine bacterium, Alteromonas sp. strain O-7.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Breakdown of chitin by Cytophaga johnsonii

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

PB-5266 A, B and C, new monobactams. I. Taxonomy, fermentation and isolation.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Nucleotide sequences of the Escherichia coli nagE and nagB genes: the structural genes for the N-acetylglucosamine transport protein of the bacterial phosphoenolpyruvate: sugar phosphotransferase system and for glucosamine-6-phosphate deaminase.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Gene cloning of chitinase A1 from Bacillus circulans WL-12 revealed its evolutionary relationship to Serratia chitinase and to the type III homology units of fibronectin

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Investigations of the pigments from Cytophaga johnsonae Cy jl. New flexirubin-type pigments.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

The ecology of Cytophaga-Flavobacteria in aquatic environments.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Identification of a Porphyromonas gingivalis novel protein sov required for the secretion of gingipains

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

The modular xylanase Xyn10A from Rhodothermus marinus is cell-attached, and its C-terminal domain has several putative homologues among cell-attached proteins within the phylum Bacteroidetes

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Negative chemotaxis in Cytophaga johnsonae.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Primary structure and expression of mRNAs encoding basic chitinase and 1,3-beta-glucanase in potato.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Cloning and expression in Escherichia coli of the nahA gene from Porphyromonas gingivalis indicates that beta-N-acetylhexosaminidase is an outer-membrane-associated lipoprotein

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

ProDom: automated clustering of homologous domains

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

Genome update: sigma factors in 240 bacterial genomes

5 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2772454

A consensus Porphyromonas gingivalis promoter sequence

3 December 2018

1 reference

12 December 2020

New class of bacterial membrane oxidoreductases

1 reference

12 December 2020

MEROPS: the peptidase database

1 reference

12 December 2020

G1499-2, a new quinoline compound isolated from the fermentation broth of Cytophaga johnsonii

1 reference

12 December 2020

The four different sigma(54) factors of Rhodobacter sphaeroides are not functionally interchangeable

1 reference

12 December 2020

PB-5266 A, B and C, new monobactams. II. Physico-chemical properties and chemical structures

1 reference

12 December 2020

Transcriptional specificity of RpoN1 and RpoN2 involves differential recognition of the promoter sequences and specific interaction with the cognate activator proteins

1 reference

12 December 2020

Cysteine is not an obligatory intermediate in the biosynthesis of cysteate by Cytophaga johnsonae

1 reference

12 December 2020

Complete genome sequence of the fish pathogen Flavobacterium psychrophilum

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.01495-09

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

19717629

1 reference