(Q37442931)

20 August 2017

ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads (English)

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20 August 2017

8

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20 August 2017

3

Sante Gnerre

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Dariusz Przybylski

2

object named as

Dariusz Przybylski

1 reference

20 August 2017

Joshua Burton

4

0 references

Chad Nusbaum

13

object named as

Chad Nusbaum

1 reference

20 August 2017

6

Andreas Gnirke

1 reference

20 August 2017

1

Iain Maccallum

1 reference

20 August 2017

Ilya Shlyakhter

5

1 reference

20 August 2017

Joel Malek

7

1 reference

20 August 2017

Swati Ranade

9

1 reference

20 August 2017

Terrance P Shea

10

1 reference

20 August 2017

Louise Williams

11

1 reference

20 August 2017

Sarah Young

12

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20 August 2017

David B Jaffe

14

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20 August 2017

1 October 2009

1 reference

20 August 2017

1 reference

20 August 2017

10

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20 August 2017

10

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20 August 2017

R103

1 reference

https://scigraph.springernature.com/pub.10.1186/gb-2009-10-10-r103

20 August 2017

0 references

cites work

Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Sensitive, specific polymorphism discovery in bacteria using massively parallel sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

A large genome center's improvements to the Illumina sequencing system

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Accurate whole human genome sequencing using reversible terminator chemistry

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Single-molecule DNA sequencing of a viral genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

ALLPATHS: de novo assembly of whole-genome shotgun microreads

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

GENE SEQUENCING: The Race for the $1000 Genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Accurate multiplex polony sequencing of an evolved bacterial genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Genome sequencing in microfabricated high-density picolitre reactors

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Quality assessment of the human genome sequence

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

The genome sequence of the filamentous fungus Neurospora crassa

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

An Eulerian path approach to DNA fragment assembly

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Base-calling of automated sequencer traces using phred. II. Error probabilities

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Directional cloning of DNA fragments at a large distance from an initial probe: a circularization method

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Short read fragment assembly of bacterial genomes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

De novo fragment assembly with short mate-paired reads: Does the read length matter?

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Extending assembly of short DNA sequences to handle error.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

Assembling millions of short DNA sequences using SSAKE.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

De novoassembly of thePseudomonas syringaepv.syringaeB728a genome using Illumina/Solexa short sequence reads

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2784318

10.1186/GB-2009-10-10-R103

3 December 2018

Identifiers

DOI

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

19796385

1 reference