(Q37469603)

20 August 2017

Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins (English)

1 reference

20 August 2017

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Benjamin Schuler

13

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Robert B. Best

object named as

Robert B Best

12

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author name string

Daniel Nettels

1

1 reference

20 August 2017

Sonja Müller-Späth

2

1 reference

20 August 2017

Frank Küster

3

1 reference

20 August 2017

Hagen Hofmann

4

1 reference

20 August 2017

Dominik Haenni

5

1 reference

20 August 2017

Stefan Rüegger

6

1 reference

20 August 2017

Luc Reymond

7

1 reference

20 August 2017

Armin Hoffmann

8

1 reference

20 August 2017

Jan Kubelka

9

1 reference

20 August 2017

Benjamin Heinz

10

1 reference

20 August 2017

Klaus Gast

11

1 reference

20 August 2017

language of work or name

English

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publication date

20 November 2009

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

1 reference

20 August 2017

106

1 reference

20 August 2017

49

1 reference

20 August 2017

20740-20745

1 reference

Optimized molecular dynamics force fields applied to the helix-coil transition of polypeptides

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

How accurate are polymer models in the analysis of Förster resonance energy transfer experiments on proteins?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Electrostatic effects on funneled landscapes and structural diversity in denatured protein ensembles

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Linking folding and binding

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Collapse transition in proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Effects of denaturants and osmolytes on proteins are accurately predicted by the molecular transfer model

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Structure and energetics of the hydrogen-bonded backbone in protein folding.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Protein folding studied by single-molecule FRET.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Relaxation rate for an ultrafast folding protein is independent of chemical denaturant concentration

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Atomic-level characterization of disordered protein ensembles

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Coil-globule transition in the denatured state of a small protein

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Single-molecule fluorescence studies of protein folding and conformational dynamics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Quantitative 3D mapping of fluidic temperatures within microchannel networks using fluorescence lifetime imaging.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

How fast is protein hydrophobic collapse?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Polyproline II structure in a sequence of seven alanine residues.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Why are "natively unfolded" proteins unstructured under physiologic conditions?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Single-molecule protein folding: diffusion fluorescence resonance energy transfer studies of the denaturation of chymotrypsin inhibitor 2

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Deciphering the timescales and mechanisms of protein folding using minimal off-lattice models

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Funnels, pathways, and the energy landscape of protein folding: a synthesis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Dominant forces in protein folding

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Polymer principles in protein structure and stability.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Ribonuclease T1 has different dimensions in the thermally and chemically denatured states: a dynamic light scattering study.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Quantitative analysis of cyclic β‐turn models

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Coulomb forces control the density of the collapsed unfolded state of barstar

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Urea-induced unfolding of the immunity protein Im9 monitored by spFRET.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Single-molecule FRET study of denaturant induced unfolding of RNase H.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Are proteins made from a limited parts list?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Rapid collapse precedes the fast two-state folding of the cold shock protein

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

On the extended beta-conformation propensity of polypeptides at high temperature

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Are there temperature-dependent structural transitions in the "intrinsically unstructured" protein prothymosin alpha?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Native-like beta-hairpin retained in the cold-denatured state of bovine beta-lactoglobulin

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Conservation of rapid two-state folding in mesophilic, thermophilic and hyperthermophilic cold shock proteins

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Reduced-denatured ribonuclease A is not in a compact state.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Prothymosin alpha: a biologically active protein with random coil conformation.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791578

Thermodynamics of aqueous guanidinium hydrochloride solutions in the temperature range from 283.15 to 313.15 K

2 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Comparison of simple potential functions for simulating liquid water

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Denatured states of ribonuclease A have compact dimensions and residual secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Influence of local and residual structures on the scaling behavior and dimensions of unfolded proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Unfolded Protein and Peptide Dynamics Investigated with Single-Molecule FRET and Correlation Spectroscopy from Picoseconds to Seconds†

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Detection and Analysis of Protein Aggregation with Confocal Single Molecule Fluorescence Spectroscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0900622106

Specific and nonspecific collapse in protein folding funnels

21 January 2018

1 reference

12 December 2020

Fully reduced ribonuclease A does not expand at high denaturant concentration or temperature

1 reference

12 December 2020

Protein interactions with urea and guanidinium chloride. A calorimetric study

1 reference

12 December 2020

Specificity of the initial collapse in the folding of the cold shock protein

1 reference

12 December 2020

Exploring structures in protein folding funnels with free energy functionals: the denatured ensemble

1 reference

12 December 2020

1 reference

12 December 2020

The Cold Denatured State Is Compact but Expands at Low Temperatures: Hydrodynamic Properties of the Cold Denatured State of the C-terminal Domain of L9

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0900622106

1 reference

20 August 2017

0 references

1 reference

20 August 2017

PubMed publication ID

19933333

1 reference