(Q37469788)

20 August 2017

Ubiquitous internal gene duplication and intron creation in eukaryotes (English)

1 reference

20 August 2017

1 reference

Xiang Gao

1

1 reference

PMCID

2791625

20 August 2017

Michael Lynch

series ordinal

2

1 reference

PMCID

2791625

20 August 2017

language of work or name

English

0 references

publication date

19 November 2009

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

1 reference

20 August 2017

106

1 reference

20 August 2017

49

1 reference

20 August 2017

20818-20823

1 reference

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

20 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Where do introns come from?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

When good transcripts go bad: artifactual RT-PCR 'splicing' and genome analysis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Splicing regulation: from a parts list of regulatory elements to an integrated splicing code

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Comparative analysis of transposed element insertion within human and mouse genomes reveals Alu's unique role in shaping the human transcriptome.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Modern origin of numerous alternatively spliced human introns from tandem arrays

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Different levels of alternative splicing among eukaryotes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Intron gain and loss in segmentally duplicated genes in rice

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The evolution of spliceosomal introns: patterns, puzzles and progress

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Reverse transcriptase template switching and false alternative transcripts.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Concerted and birth-and-death evolution of multigene families

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

A genome-wide comparison of recent chimpanzee and human segmental duplications

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Origins of recently gained introns in Caenorhabditis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The structure and early evolution of recently arisen gene duplicates in the Caenorhabditis elegans genome.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The evolutionary demography of duplicate genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Large genomic deletions and duplications in the BRCA1 gene identified by a novel quantitative method

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Common exon duplication in animals and its role in alternative splicing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Yesterday's polyploids and the mystery of diploidization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Polyploid Incidence and Evolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The evolutionary fate and consequences of duplicate genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

T-Coffee: A novel method for fast and accurate multiple sequence alignment

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

De novo synthesis of an intron by the maize transposable element Dissociation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Basic local alignment search tool

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The splicing of transposable elements and its role in intron evolution

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Partial gene duplication as a cause of human disease

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

The splicing of maize transposable elements from pre-mRNA--a minireview

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

How were introns inserted into nuclear genes?

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Age distribution of human gene families shows significant roles of both large- and small-scale duplications in vertebrate evolution.

23 August 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Origin of alternative splicing by tandem exon duplication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Tandem duplication of DMD exon 18 associated with epilepsy, macroglossia, and endocrinologic abnormalities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Patterns of intron loss and gain in plants: intron loss-dominated evolution and genome-wide comparison of O. sativa and A. thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Intron loss and gain in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Characterization of intron loss events in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Smoke without fire: most reported cases of intron gain in nematodes instead reflect intron losses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Accelerated rates of intron gain/loss and protein evolution in duplicate genes in human and mouse malaria parasites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

A tourist element in the 5'-flanking region of the catalase gene CatA reveals evolutionary relationships among Oryza species with various genome types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Birth of two chimeric genes in the Hominidae lineage.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Models of amino acid substitution and applications to mitochondrial protein evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Comment on "When good transcripts go bad: artifactual RT-PCR 'splicing' and genome analysis"

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2791625

Origin of introns by ‘intronization’ of exonic sequences

2 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0911093106

Evolutionary origin and functions of retrogene introns

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19926850

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0911093106

1 reference

20 August 2017

0 references

1 reference

20 August 2017

1 reference

PMCID

2791625