(Q37532007)

20 August 2017

Linkage between bacterial and fungal rhizosphere communities in hydrocarbon-contaminated soils is related to plant phylogeny (English)

1 reference

20 August 2017

1 reference

1 reference

1 reference

5

1 reference

20 August 2017

Etienne Yergeau

6

0 references

Marc St-Arnaud

object named as

Marc St-Arnaud

7

0 references

author name string

Terrence H Bell

1

1 reference

20 August 2017

Saad El-Din Hassan

2

1 reference

20 August 2017

Aurélien Lauron-Moreau

3

1 reference

20 August 2017

Fahad Al-Otaibi

4

1 reference

20 August 2017

29 August 2013

1 reference

20 August 2017

1 reference

20 August 2017

8

1 reference

20 August 2017

2

1 reference

20 August 2017

331-343

1 reference

describes a project that uses

20 August 2017

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

Predictable bacterial composition and hydrocarbon degradation in Arctic soils following diesel and nutrient disturbance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Phylogenetic conservatism of functional traits in microorganisms

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

A drought resistance-promoting microbiome is selected by root system under desert farming

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Rapid responses of soil microorganisms improve plant fitness in novel environments

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Recovering greater fungal diversity from pristine and diesel fuel contaminated sub-antarctic soil through cultivation using both a high and a low nutrient media approach.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Using network analysis to explore co-occurrence patterns in soil microbial communities

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Deciphering the rhizosphere microbiome for disease-suppressive bacteria

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Untapped potential: exploiting fungi in bioremediation of hazardous chemicals.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Cytoscape 2.8: new features for data integration and network visualization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Functional gene diversity of soil microbial communities from five oil-contaminated fields in China.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Experimental demonstration of the importance of competition under disturbance

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Ongoing coevolution in mycorrhizal interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Diverse bacteria inhabit living hyphae of phylogenetically diverse fungal endophytes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Resource limitation is a driver of local adaptation in mycorrhizal symbioses

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Plants, mycorrhizal fungi, and bacteria: a network of interactions

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Enhanced phytoremediation of volatile environmental pollutants with transgenic trees

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Influence of phylogeny on fungal community assembly and ecosystem functioning

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

The diversity and biogeography of soil bacterial communities

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Living in a fungal world: impact of fungi on soil bacterial niche development

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Bioaugmentation for bioremediation: the challenge of strain selection

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Selection of specific endophytic bacterial genotypes by plants in response to soil contamination

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Metals affect soil bacterial and fungal functional diversity differently.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

An endophytic/pathogenic Phoma sp. from creosote bush producing biologically active volatile compounds having fuel potential

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

The genome of the obligate endobacterium of an AM fungus reveals an interphylum network of nutritional interactions

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Metal toxicity affects fungal and bacterial activities in soil differently

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Alteration of microbial community structure affects diesel biodegradation in an Arctic soil

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Plant residues--a low cost, effective bioremediation treatment for petrogenic hydrocarbon-contaminated soil.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Biotic contexts alter metal sequestration and AMF effects on plant growth in soils polluted with heavy metals.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Quantifying microbial communities with 454 pyrosequencing: does read abundance count?

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Plant species richness, identity and productivity differentially influence key groups of microbes in grassland soils of contrasting fertility

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Soil bacterial and fungal communities across a pH gradient in an arable soil.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Plant host habitat and root exudates shape soil bacterial community structure

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Spatial covariation of microbial community composition and polycyclic aromatic hydrocarbon concentration in a creosote-polluted soil

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Examining the fungal and bacterial niche overlap using selective inhibitors in soil

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Relationship between assemblages of mycorrhizal fungi and bacteria on grass roots.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Repression of Pseudomonas putida phenanthrene-degrading activity by plant root extracts and exudates

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3906811

Salix (Salicaceae) Distribution Maps and a Synopsis of Their Classification in North America, North of Mexico

2 September 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Microsatellite Markers of Willow Species and Characterization of 11 Polymorphic Microsatellites for Salix eriocephala (Salicaceae), a Potential Native Species for Biomass Production in Canada

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Population genetic structure of native versus naturalized sympatric shrub willows (Salix ; Salicaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Antagonistic and synergistic effects of fungal and bacterial growth in soil after adding different carbon and nitrogen sources

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Antagonism between bacteria and fungi: substrate competition and a possible tradeoff between fungal growth and tolerance towards bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Acquisition of phosphorus and nitrogen in the rhizosphere and plant growth promotion by microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

Biostimulation and bioaugmentation for on-site treatment of weathered diesel fuel in Arctic soil

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23985744

12 December 2020

inferred from PubMed ID database lookup

Diversity of diterpene hydrocarbons in fungus Phoma betae

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

7 January 2021

inferred from DOI database lookup

Field-scale assessment of weathered hydrocarbon degradation by mixed and single plant treatments

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

7 January 2021

inferred from DOI database lookup

Nitrifier dominance of Arctic soil nitrous oxide emissions arises due to fungal competition with denitrifiers for nitrate

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2013.149

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/ISMEJ.2013.149

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

23985744

1 reference