(Q37537668)

20 August 2017

Understanding the photophysics of the spinach-DFHBI RNA aptamer-fluorogen complex to improve live-cell RNA imaging (English)

1 reference

20 August 2017

1 reference

5

Taekjip Ha

1 reference

20 August 2017

3

Jingyi Fei

1 reference

20 August 2017

Kyu Young Han

1

1 reference

20 August 2017

Benjamin J Leslie

series ordinal

2

1 reference

20 August 2017

Jichuan Zhang

series ordinal

4

1 reference

20 August 2017

language of work or name

English

0 references

publication date

10 December 2013

1 reference

Journal of the American Chemical Society

20 August 2017

1 reference

20 August 2017

135

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20 August 2017

50

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20 August 2017

19033-19038

1 reference

describes a project that uses

20 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3908778/fullTextXML

inferred from PubMed Central ID database lookup

cites work

A superfolding Spinach2 reveals the dynamic nature of trinucleotide repeat-containing RNA

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The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

23 August 2017

1 reference

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Fluorescent proteins: shine on, you crazy diamond.

23 August 2017

1 reference

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Fluorescence imaging of cellular metabolites with RNA.

23 August 2017

1 reference

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Modular regulatory principles of large non-coding RNAs

23 August 2017

1 reference

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Collapse and recovery of green fluorescent protein chromophore emission through topological effects.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Analysis of red-fluorescent proteins provides insight into dark-state conversion and photodegradation

23 August 2017

1 reference

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RNA mimics of green fluorescent protein

23 August 2017

1 reference

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The widespread regulation of microRNA biogenesis, function and decay

23 August 2017

1 reference

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Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

The fluorescent protein palette: tools for cellular imaging

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

mRNA localization: gene expression in the spatial dimension

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Imaging individual mRNA molecules using multiple singly labeled probes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: a blue fluorescent RNA.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Cis-trans photoisomerization of fluorescent-protein chromophores

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

A practical guide to single-molecule FRET

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

In vivo dynamics of RNA polymerase II transcription.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Structural basis for reversible photoswitching in Dronpa

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Visualization of molecular interactions by fluorescence complementation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

From birth to death: the complex lives of eukaryotic mRNAs

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

RNA dynamics in live Escherichia coli cells

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Dynamics of single mRNPs in nuclei of living cells.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Single mRNA molecules demonstrate probabilistic movement in living mammalian cells

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Localization of ASH1 mRNA particles in living yeast

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Use of the green fluorescent protein and its mutants in quantitative fluorescence microscopy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

On/off blinking and switching behaviour of single molecules of green fluorescent protein

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

New approaches for sensing metabolites and proteins in live cells using RNA.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Computational and experimental analyses converge to reveal a coherent yet malleable aptamer structure that controls chemical reactivity.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

RNA visualization in live bacterial cells using fluorescent protein complementation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Visualization of single RNA transcripts in situ

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Imaging bacterial protein expression using genetically encoded RNA sensors.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Combining SELEX screening and rational design to develop light-up fluorophore-RNA aptamer pairs for RNA tagging

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

LambdaN-GFP: an RNA reporter system for live-cell imaging

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Imaging dynamics of endogenous mitochondrial RNA in single living cells.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Ultrafast Studies of the Photophysics of Cis and Trans States of the Green Fluorescent Protein Chromophore.

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Major signal increase in fluorescence microscopy through dark-state relaxation.

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Aptamers switch on fluorescence of triphenylmethane dyes

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Chromophore environment provides clue to "kindling fluorescent protein" riddle

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Binding to an RNA aptamer changes the charge distribution and conformation of malachite green

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3908778

Fluorescent sensors for specific RNA: a general paradigm using chemistry and combinatorial biology

1 September 2018

1 reference

12 December 2020

Metastable dark States enable ground state depletion microscopy of nitrogen vacancy centers in diamond with diffraction-unlimited resolution

1 reference

12 December 2020

Synthesis of New Fluorogenic Cyanine Dyes and Incorporation into RNA Fluoromodules

1 reference

12 December 2020

Highly localized tracks of specific transcripts within interphase nuclei visualized by in situ hybridization

1 reference

12 December 2020

Identifiers

DOI

10.1021/JA411060P

1 reference

20 August 2017

1 reference

20 August 2017

1 reference