(Q37581528)

21 August 2017

Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities (English)

1 reference

21 August 2017

1

Gongchao Jing

1 reference

21 August 2017

8

Xiaoquan Su

1 reference

21 August 2017

Zheng Sun

2

1 reference

21 August 2017

Honglei Wang

3

1 reference

21 August 2017

Yanhai Gong

4

1 reference

21 August 2017

Shi Huang

5

1 reference

21 August 2017

Kang Ning

6

1 reference

21 August 2017

Jian Xu

7

1 reference

21 August 2017

language of work or name

English

0 references

publication date

12 January 2017

1 reference

21 August 2017

1 reference

21 August 2017

7

1 reference

21 August 2017

40371

1 reference

Creative Commons Attribution 4.0 International

21 August 2017

start time

12 January 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Microbiome Data Science: Understanding Our Microbial Planet

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Ocean plankton. Structure and function of the global ocean microbiome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Parallel-META 2.0: enhanced metagenomic data analysis with functional annotation, high performance computing and advanced visualization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Metagenomic species profiling using universal phylogenetic marker genes

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Computational meta'omics for microbial community studies

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

A guide to enterotypes across the human body: meta-analysis of microbial community structures in human microbiome datasets

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Parallel-META: efficient metagenomic data analysis based on high-performance computation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Microbial co-occurrence relationships in the human microbiome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Human gut microbiome viewed across age and geography

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

A framework for human microbiome research

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Structure, function and diversity of the healthy human microbiome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Fast gapped-read alignment with Bowtie 2

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

IMG: the Integrated Microbial Genomes database and comparative analysis system

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

KEGG for integration and interpretation of large-scale molecular data sets

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Accelerated Profile HMM Searches

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

QIIME allows analysis of high-throughput community sequencing data

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

FastTree 2--approximately maximum-likelihood trees for large alignments

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

The Sequence Alignment/Map format and SAMtools

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

The core gut microbiome, energy balance and obesity

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5227994

2 October 2018

Identifiers

DOI

10.1038/SREP40371

1 reference

21 August 2017

1 reference

21 August 2017

PubMed publication ID

28079128

1 reference