(Q37608083)

21 August 2017

1 reference

title

Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway (English)

1 reference

21 August 2017

0 references

Sadegh Azimzadeh Jamalkandi

series ordinal

1

1 reference

21 August 2017

Ali Masoudi-Nejad

series ordinal

2

1 reference

21 August 2017

publication date

1 November 2009

1 reference

Functional and Integrative Genomics

21 August 2017

published in

1 reference

21 August 2017

volume

9

1 reference

21 August 2017

issue

4

1 reference

21 August 2017

page(s)

419-432

1 reference

UV-B responsive microRNA genes in Arabidopsis thaliana

21 August 2017

cites work

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS10142-009-0141-Z

An RNA-dependent RNA polymerase prevents meristem invasion by potato virus X and is required for the activity but not the production of a systemic silencing signal

21 January 2018

1 reference

12 December 2020

Radial patterning of Arabidopsis shoots by class III HD-ZIP and KANADI genes

1 reference

12 December 2020

The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis

1 reference

12 December 2020

ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase

1 reference

12 December 2020

Atypical RNA polymerase subunits required for RNA-directed DNA methylation

1 reference

12 December 2020

High-stearic and High-oleic cottonseed oils produced by hairpin RNA-mediated post-transcriptional gene silencing

1 reference

12 December 2020

Macro effects of microRNAs in plants.

1 reference

12 December 2020

RNA-directed DNA methylation in Arabidopsis

1 reference

12 December 2020

MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development

1 reference

12 December 2020

The diversity of RNA silencing pathways in plants

1 reference

12 December 2020

Molecular mechanism of RNA silencing suppression mediated by p19 protein of tombusviruses

1 reference

12 December 2020

RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis

1 reference

12 December 2020

MicroRNA biogenesis and function in plants

1 reference

12 December 2020

The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis.

1 reference

12 December 2020

Nuclear processing and export of microRNAs in Arabidopsis.

1 reference

12 December 2020

RNAi and epigenetics: Pol IV is a matchmaker of small RNAs meeting with chromatin

1 reference

12 December 2020

Methylation as a crucial step in plant microRNA biogenesis

1 reference

12 December 2020

Small silencing RNAs: an expanding universe

1 reference

12 December 2020

Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

1 reference

12 December 2020

MicroRNAs modulate hematopoietic lineage differentiation

1 reference

12 December 2020

Expression of the thyroid hormone receptor gene, erbAalpha, in B lymphocytes: alternative mRNA processing is independent of differentiation but correlates with antisense RNA levels.

1 reference

12 December 2020

Histone methylation controls telomerase-independent telomere lengthening in cells undergoing dedifferentiation.

1 reference

12 December 2020

siRNA and miRNA processing: new functions for Cajal bodies.

1 reference

12 December 2020

Tsix, a gene antisense to Xist at the X-inactivation centre

1 reference

12 December 2020

Spreading of RNA targeting and DNA methylation in RNA silencing requires transcription of the target gene and a putative RNA-dependent RNA polymerase

1 reference

12 December 2020

SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis

1 reference

12 December 2020

An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells

1 reference

12 December 2020

The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center

1 reference

12 December 2020

The timing of developmental transitions in plants

1 reference

12 December 2020

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

1 reference

12 December 2020

Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes

1 reference

12 December 2020

Transitivity-dependent and -independent cell-to-cell movement of RNA silencing

1 reference

12 December 2020

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

1 reference

12 December 2020

Transcription of antisense RNA leading to gene silencing and methylation as a novel cause of human genetic disease

1 reference

12 December 2020

A SNF2-like protein facilitates dynamic control of DNA methylation

1 reference

12 December 2020

Gene silencing and homology-dependent gene silencing in Arabidopsis: genetic modifiers and DNA methylation

1 reference

12 December 2020

Involvement of putative SNF2 chromatin remodeling protein DRD1 in RNA-directed DNA methylation

1 reference

12 December 2020

A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans

1 reference

12 December 2020

Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans

1 reference

12 December 2020

A biochemical framework for RNA silencing in plants

1 reference

12 December 2020

AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals

1 reference

12 December 2020

Arabidopsis HEN1: a genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance

1 reference

12 December 2020

Target-specific requirements for enhancers of decapping in miRNA-mediated gene silencing

1 reference

12 December 2020

Transitivity in Arabidopsis can be primed, requires the redundant action of the antiviral Dicer-like 4 and Dicer-like 2, and is compromised by viral-encoded suppressor proteins.

1 reference

12 December 2020

The functions of animal microRNAs

1 reference

12 December 2020

Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa

1 reference

12 December 2020

1 reference

12 December 2020

ATP requirements and small interfering RNA structure in the RNA interference pathway

1 reference

12 December 2020

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

1 reference

12 December 2020

Interplay between two epigenetic marks. DNA methylation and histone H3 lysine 9 methylation

1 reference

12 December 2020

Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression

1 reference

12 December 2020

Locus-specific control of DNA methylation by the Arabidopsis SUVH5 histone methyltransferase

1 reference

12 December 2020

Role of the arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing

1 reference

12 December 2020

Transcriptional collision between convergent genes in budding yeast.

1 reference

12 December 2020

RNA editing and regulation of Drosophila 4f-rnp expression by sas-10 antisense readthrough mRNA transcripts

1 reference

12 December 2020

SERRATE: a new player on the plant microRNA scene.

1 reference

12 December 2020

Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing.

1 reference

12 December 2020

DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7.

1 reference

12 December 2020

A whole-genome RNAi Screen for C. elegans miRNA pathway genes

1 reference

12 December 2020

The early extra petals1 mutant uncovers a role for microRNA miR164c in regulating petal number in Arabidopsis.

1 reference

12 December 2020

Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance

1 reference

12 December 2020

Untranslatable transcripts of the tobacco etch virus coat protein gene sequence can interfere with tobacco etch virus replication in transgenic plants and protoplasts

1 reference

12 December 2020

RNAi-mediated pathways in the nucleus

1 reference

12 December 2020

A gene encoding an RNase D exonuclease-like protein is required for post-transcriptional silencing in Arabidopsis

1 reference

12 December 2020

DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal

1 reference

12 December 2020

Plant microRNA: a small regulatory molecule with big impact

1 reference

12 December 2020

microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity.

1 reference

12 December 2020

Prediction of plant microRNA targets

1 reference

12 December 2020

Post-transcriptional small RNA pathways in plants: mechanisms and regulations

1 reference

12 December 2020

Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions.

1 reference

12 December 2020

Characterization and quantitation of differential Tsix transcripts: implications for Tsix function

1 reference

12 December 2020

Evidence for nuclear processing of plant micro RNA and short interfering RNA precursors

1 reference

12 December 2020

P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA unction

1 reference

12 December 2020

Total silencing by intron-spliced hairpin RNAs

1 reference

12 December 2020

An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

1 reference

12 December 2020

Transcriptional and posttranscriptional plant gene silencing in response to a pathogen

1 reference

12 December 2020

Arabidopsis endogenous small RNAs: highways and byways

1 reference

12 December 2020

Genetic and functional diversification of small RNA pathways in plants

1 reference

12 December 2020

The SRA methyl-cytosine-binding domain links DNA and histone methylation

1 reference

12 December 2020

bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila

1 reference

12 December 2020

Reversible methylation and inactivation of marker genes in sequentially transformed tobacco plants.

1 reference

12 December 2020

Plant and animal microRNAs: similarities and differences.

1 reference

12 December 2020

On the role of RNA amplification in dsRNA-triggered gene silencing

1 reference

12 December 2020

The exoribonuclease XRN4 is a component of the ethylene response pathway in Arabidopsis

1 reference

12 December 2020

A link between mRNA turnover and RNA interference in Arabidopsis.

1 reference

12 December 2020

Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline

1 reference

12 December 2020

MicroRNAs: more than a role in plant development?

1 reference

12 December 2020

Gardening the genome: DNA methylation in Arabidopsis thaliana

1 reference

12 December 2020

A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis

1 reference

12 December 2020

A pathogen-inducible endogenous siRNA in plant immunity

1 reference

12 December 2020

DEMETER and REPRESSOR OF SILENCING 1 encode 5-methylcytosine DNA glycosylases.

1 reference

12 December 2020

ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

1 reference

12 December 2020

Role of the DRM and CMT3 methyltransferases in RNA-directed DNA methylation.

1 reference

12 December 2020

Simulations of virtual plants reveal a role for SERRATE in the response of leaf development to light in Arabidopsis thaliana

1 reference

12 December 2020

Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA

1 reference

12 December 2020

Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step

1 reference

12 December 2020

MicroRNAs: genomics, biogenesis, mechanism, and function

1 reference

12 December 2020

Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance

1 reference

12 December 2020

Dicer-like (DCL) proteins in plants

1 reference

12 December 2020

Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana.

1 reference

12 December 2020

Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.

1 reference

12 December 2020

SERRATE is a novel nuclear regulator in primary microRNA processing in Arabidopsis

1 reference

12 December 2020

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis

1 reference

12 December 2020

miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs

1 reference

12 December 2020

RDR6 has a broad-spectrum but temperature-dependent antiviral defense role in Nicotiana benthamiana

1 reference

12 December 2020

Two-step recruitment of RNA-directed DNA methylation to tandem repeats

1 reference

12 December 2020

An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus

1 reference

12 December 2020

The arabidopsis serrate gene encodes a zinc-finger protein required for normal shoot development

1 reference

12 December 2020

HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2' OH of the 3' terminal nucleotide

1 reference

12 December 2020

A Dicer-2-dependent 80s complex cleaves targeted mRNAs during RNAi in Drosophila

1 reference

12 December 2020

RNA silencing in plants: yesterday, today, and tomorrow.

1 reference

12 December 2020

Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues.

1 reference

12 December 2020

Endogenous targets of RNA-directed DNA methylation and Pol IV in Arabidopsis.

1 reference

12 December 2020

microPrimer: the biogenesis and function of microRNA.

1 reference

12 December 2020

The SERRATE locus controls the formation of the early juvenile leaves and phase length in Arabidopsis.

1 reference

12 December 2020

CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana

1 reference

12 December 2020

A species of small antisense RNA in posttranscriptional gene silencing in plants

1 reference

12 December 2020

Widespread RNA editing of embedded alu elements in the human transcriptome

1 reference

12 December 2020

Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs

1 reference

12 December 2020

RNA polymerase IV directs silencing of endogenous DNA.

1 reference

12 December 2020

Targets of RNA-directed DNA methylation

1 reference

12 December 2020

SPOUT: a class of methyltransferases that includes spoU and trmD RNA methylase superfamilies, and novel superfamilies of predicted prokaryotic RNA methylases.

1 reference

12 December 2020

Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA.

1 reference

12 December 2020

SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis

1 reference

12 December 2020

The Drosophila MicroRNA Mir-14 Suppresses Cell Death and Is Required for Normal Fat Metabolism

1 reference

12 December 2020

Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs.

1 reference

12 December 2020

Dual roles of the nuclear cap-binding complex and SERRATE in pre-mRNA splicing and microRNA processing in Arabidopsis thaliana

1 reference

12 December 2020

Control of leaf morphogenesis by microRNAs

1 reference

12 December 2020

microRNA-directed phasing during trans-acting siRNA biogenesis in plants

1 reference

12 December 2020

The developmental role of microRNA in plants

1 reference

12 December 2020

Maintenance of DNA methylation during the Arabidopsis life cycle is essential for parental imprinting

1 reference

12 December 2020

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation

1 reference

12 December 2020

Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

1 reference

12 December 2020

A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development

1 reference

12 December 2020

Cajal bodies: the first 100 years

1 reference

12 December 2020

A mutation in the Arabidopsis HYL1 gene encoding a dsRNA binding protein affects responses to abscisic acid, auxin, and cytokinin

1 reference

12 December 2020

A systemic small RNA signaling system in plants.

1 reference

12 December 2020

The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development.

1 reference

12 December 2020

The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation

1 reference

12 December 2020

Identification of drought-induced microRNAs in rice

1 reference

12 December 2020

DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana

1 reference

12 December 2020

Processing of primary microRNAs by the Microprocessor complex

1 reference

12 December 2020

Dimethylation of histone H3 lysine 9 is a critical mark for DNA methylation and gene silencing in Arabidopsis thaliana.

1 reference

12 December 2020

Common themes in siRNA-mediated epigenetic silencing pathways.

1 reference

12 December 2020

Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance

1 reference

12 December 2020

AtXRN4 degrades mRNA in Arabidopsis and its substrates include selected miRNA targets

1 reference

12 December 2020

Tsix transcription- versus RNA-based mechanisms in Xist repression and epigenetic choice.

1 reference

12 December 2020

Small RNAs and the regulation of cis-natural antisense transcripts in Arabidopsis.

1 reference

12 December 2020

Genomics of microRNA.

1 reference

12 December 2020

Specific and heritable genetic interference by double-stranded RNA in Arabidopsis thaliana

1 reference

12 December 2020

Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

1 reference

12 December 2020

Biochemical specialization within Arabidopsis RNA silencing pathways

1 reference

12 December 2020

The Microprocessor complex mediates the genesis of microRNAs

1 reference

12 December 2020

1 reference

12 December 2020

10.1007/S10142-009-0141-Z

Identifiers

DOI

1 reference

21 August 2017

1 reference