(Q37653031)

21 August 2017

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title

Bioinformatical approaches to characterize intrinsically disordered/unstructured proteins (English)

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21 August 2017

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2

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21 August 2017

Zsuzsanna Dosztányi

1

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21 August 2017

István Simon

series ordinal

3

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21 August 2017

publication date

10 December 2009

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Briefings in Bioinformatics

21 August 2017

published in

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21 August 2017

volume

11

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21 August 2017

issue

2

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21 August 2017

page(s)

225-243

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Intrinsically unstructured proteins and their functions

21 August 2017

cites work

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsically disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsically unstructured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsic disorder in transcription factors

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Malleable machines take shape in eukaryotic transcriptional regulation

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Regulation of cell division by intrinsically unstructured proteins: intrinsic flexibility, modularity, and signaling conduits

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Flexible nets. The roles of intrinsic disorder in protein interaction networks.

21 January 2018

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https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Showing your ID: intrinsic disorder as an ID for recognition, regulation and cell signaling

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsic disorder in cell-signaling and cancer-associated proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsically Disordered Proteins in Human Diseases: Introducing the D 2 Concept

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Rational drug design via intrinsically disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Natively unfolded proteins: a point where biology waits for physics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Site-specific dimensions across a highly denatured protein; a single molecule study

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction of protein disorder at the domain level

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Intrinsic disorder in the Protein Data Bank

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

The interplay between structure and function in intrinsically unstructured proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Coupling of folding and binding for unstructured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Analysis of ordered and disordered protein complexes reveals structural features discriminating between stable and unstable monomers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Characterization of molecular recognition features, MoRFs, and their binding partners

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

The importance of intrinsic disorder for protein phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Combining prediction, computation and experiment for the characterization of protein disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Assessing protein disorder and induced folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction of protein secondary structure at better than 70% accuracy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Protein secondary structure prediction based on position-specific scoring matrices

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Application of multiple sequence alignment profiles to improve protein secondary structure prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Conservation and prediction of solvent accessibility in protein families

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Accurate prediction of solvent accessibility using neural networks-based regression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

DISULFIND: a disulfide bonding state and cysteine connectivity prediction server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

MetalDetector: a web server for predicting metal-binding sites and disulfide bridges in proteins from sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Computer-assisted protein domain boundary prediction using the DomPred server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

ISIS: interaction sites identified from sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Principles governing amino acid composition of integral membrane proteins: application to topology prediction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

TM or not TM: transmembrane protein prediction with low false positive rate using DAS-TMfilter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

A practical overview of protein disorder prediction methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction of protein disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Predicting intrinsic disorder in proteins: an overview

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

21 January 2018

The Protein Data Bank

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

DisProt: the Database of Disordered Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Predicting mostly disordered proteins by using structure-unknown protein data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Influence of sequence changes and environment on intrinsically disordered proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prevalence of intrinsic disorder in the intracellular region of human single-pass type I proteins: the case of the notch ligand Delta-4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Length-dependent prediction of protein intrinsic disorder.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Improved disorder prediction by combination of orthogonal approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Protein flexibility and intrinsic disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

TOP-IDP-scale: a new amino acid scale measuring propensity for intrinsic disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

FoldUnfold: web server for the prediction of disordered regions in protein chain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

GlobPlot: Exploring protein sequences for globularity and disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Protein disorder prediction by condensed PSSM considering propensity for order or disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Non-globular domains in protein sequences: automated segmentation using complexity measures

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Sequence complexity of disordered protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Disorder and sequence repeats in hub proteins and their implications for network evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Evolutionary rate heterogeneity in proteins with long disordered regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Dynamic behavior of an intrinsically unstructured linker domain is conserved in the face of negligible amino acid sequence conservation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Preformed structural elements feature in partner recognition by intrinsically unstructured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Charged single alpha-helix: a versatile protein structural motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

iPDA: integrated protein disorder analyzer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

OnD-CRF: predicting order and disorder in proteins using [corrected] conditional random fields

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Natively unstructured loops differ from other loops

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Protein disorder prediction: implications for structural proteomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

RONN: the bio-basis function neural network technique applied to the detection of natively disordered regions in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

PrDOS: prediction of disordered protein regions from amino acid sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

CDF it all: consensus prediction of intrinsically disordered proteins based on various cumulative distribution functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction of disordered regions in proteins based on the meta approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

FoldIndex: a simple tool to predict whether a given protein sequence is intrinsically unfolded

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

An iterative method for extracting energy-like quantities from protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Prediction of protein binding regions in disordered proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

ANCHOR: web server for predicting protein binding regions in disordered proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Viral mechanisms involved in the transcriptional CBP/p300 regulation of inflammatory and immune responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Packing, specificity, and mutability at the binding interface between the p160 coactivator and CREB-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Interaction of calpastatin with calpain: a review

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Local structural preferences of calpastatin, the intrinsically unstructured protein inhibitor of calpain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

The Pfam protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Partitioning protein structures into domains: why is it so difficult?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Elucidating the folding problem of alpha-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of NMR parameters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Crystal structure of the hexamer of human heat shock factor binding protein 1

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Concerted multi-pronged attack by calpastatin to occlude the catalytic cleft of heterodimeric calpains

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Data Deposition and Annotation at the Worldwide Protein Data Bank

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Molecular Principles of the Interactions of Disordered Proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

Assessment of disorder predictions in CASP8

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIB%2FBBP061

21 January 2018

Identifiers

DOI

10.1093/BIB/BBP061

1 reference

journals/bib/DosztanyiMS10

21 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference