(Q37692844)

22 August 2017

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title

The population genetics of commensal Escherichia coli (English)

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22 August 2017

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1

Olivier Tenaillon

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22 August 2017

4

Erick Denamur

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22 August 2017

David Skurnik

2

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22 August 2017

Bertrand Picard

series ordinal

3

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22 August 2017

language of work or name

English

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publication date

1 March 2010

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Nature Reviews Microbiology

22 August 2017

published in

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22 August 2017

volume

8

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22 August 2017

issue

3

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22 August 2017

page(s)

207-217

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https://scigraph.springernature.com/pub.10.1038/nrmicro2298

22 August 2017

exact match

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Phenotypic and genotypic characterization of encapsulated Escherichia coli isolated from blooms in two Australian lakes

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Factors influencing the composition of the intestinal microbiota in early infancy

31 March 2020

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Carbon nutrition of Escherichia coli in the mouse intestine

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Respiration of Escherichia coli in the mouse intestine

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Inhibition of Escherichia coli precursor-16S rRNA processing by mouse intestinal contents

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The acquisition of Escherichia coli by new-born babies

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Escherichia coli in Infants' Intestinal Microflora: Colonization Rate, Strain Turnover, and Virulence Gene Carriage

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Effects of intrapartum penicillin prophylaxis on intestinal bacterial colonization in infants

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Implantation and in vivo antagonistic effects of antibiotic-susceptible Escherichia coli strains administered to premature newborns.

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Colonization resistance

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Escherichia coli strains colonising the gastrointestinal tract protect germfree mice against Salmonella typhimurium infection

31 March 2020

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Reduction of Escherichia coli O157:H7 populations in cattle by addition of colicin E7-producing E. coli to feed

31 March 2020

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31 March 2020

How clonal are bacteria?

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Special Escherichia coli serotypes among enterotoxigenic strains from diarrhoea in adults and children

31 March 2020

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Electrophoretic Variation in Escherichia coli from Natural Sources

31 March 2020

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Genetic diversity and structure in Escherichia coli populations

31 March 2020

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Evidence for clonal population structure in Escherichia coli

31 March 2020

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Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism

31 March 2020

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Clustered Third-Base Substitutions Among Wild Strains of Escherichia coli

31 March 2020

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Genetic exchange among natural isolates of bacteria: recombination within the phoA gene of Escherichia coli

31 March 2020

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Nucleotide sequences of the gnd genes from nine natural isolates of Escherichia coli: evidence of intragenic recombination as a contributing factor in the evolution of the polymorphic gnd locus

31 March 2020

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Recombination in Escherichia coli and the definition of biological species

31 March 2020

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Clonal divergence in Escherichia coli as a result of recombination, not mutation

31 March 2020

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Nucleotide polymorphism and evolution in the glyceraldehyde-3-phosphate dehydrogenase gene (gapA) in natural populations of Salmonella and Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Heterogeneity of genome sizes among natural isolates of Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Distribution of chromosome length variation in natural isolates of Escherichia coli.

31 March 2020

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Order and disorder during Escherichia coli divergence

31 March 2020

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The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates

31 March 2020

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Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

31 March 2020

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Lateral gene transfer and the nature of bacterial innovation

31 March 2020

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The MatP/matS site-specific system organizes the terminus region of the E. coli chromosome into a macrodomain.

31 March 2020

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Role of intraspecies recombination in the spread of pathogenicity islands within the Escherichia coli species

31 March 2020

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Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli

31 March 2020

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Parallel evolution of virulence in pathogenic Escherichia coli.

31 March 2020

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Decreasing the effects of horizontal gene transfer on bacterial phylogeny: the Escherichia coli case study.

31 March 2020

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Sex and virulence in Escherichia coli: an evolutionary perspective

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Assigning Escherichia coli strains to phylogenetic groups: multi-locus sequence typing versus the PCR triplex method.

31 March 2020

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Molecular and evolutionary relationships among enteric bacteria

31 March 2020

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Escherichia coli molecular phylogeny using the incongruence length difference test

31 March 2020

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Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains

31 March 2020

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aes, the gene encoding the esterase B in Escherichia coli, is a powerful phylogenetic marker of the species

31 March 2020

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Extraintestinal virulence is a coincidental by-product of commensalism in B2 phylogenetic group Escherichia coli strains.

31 March 2020

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Large-scale population structure of human commensal Escherichia coli isolates

31 March 2020

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Characteristics of human intestinal Escherichia coli with changing environments

31 March 2020

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Identification of forces shaping the commensal Escherichia coli genetic structure by comparing animal and human isolates.

31 March 2020

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Distribution of multilocus genotypes of Escherichia coli within and between host families

31 March 2020

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Escherichia coli colonization patterns among human household members and pets, with attention to acute urinary tract infection.

31 March 2020

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Fate Of Ingested Escherichia Coli In Normal Persons

31 March 2020

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Evolution of the barrier effects against an exogenous drug-sensitive Escherichia coli strain after single or repeated oral administration to newborns and infants aged up to three months admitted to an intensive-care unit.

31 March 2020

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Relative colonizing abilities of human fecal and K 12 strains of Escherichia coli in the large intestines of streptomycin-treated mice.

31 March 2020

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Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations

31 March 2020

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Both urinary and rectal Escherichia coli isolates are dominated by strains of phylogenetic group B2.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Vaginal Escherichia coli share common virulence factor profiles, serotypes and phylogeny with other extraintestinal E. coli.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Escherichia coli strains from pregnant women and neonates: intraspecies genetic distribution and prevalence of virulence factors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Escherichia coli strains belonging to phylogenetic group B2 have superior capacity to persist in the intestinal microflora of infants.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Influence of the age and sex of human hosts on the distribution of Escherichia coli ECOR groups and virulence traits

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Population structure and resistance genes in antibiotic-resistant bacteria from a remote community with minimal antibiotic exposure

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Phylogenetic group B2 Escherichia coli strains from the bowel microbiota of Pakistani infants carry few virulence genes and lack the capacity for long-term persistence.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Effect of human vicinity on antimicrobial resistance and integrons in animal faecal Escherichia coli

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Phylogenetic background, virulence gene profiles, and genomic diversity in commensal Escherichia coli isolated from ten mammal species living in one zoo.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Evidence for a human-specific Escherichia coli clone.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Diversity analysis of commensal porcine Escherichia coli - associations between genotypes and habitat in the porcine gastrointestinal tract

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Pathogenicity islands and the evolution of microbes

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

The evolution and maintenance of virulence in microparasites

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Resident Colonic Escherichia coli Strains Frequently Display Uropathogenic Characteristics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Enhanced persistence in the colonic microbiota of Escherichia coli strains belonging to phylogenetic group B2: role of virulence factors and adherence to colonic cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Structure and urovirulence characteristics of the fecal Escherichia coli population among healthy women

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Multiple-host sharing, long-term persistence, and virulence of Escherichia coli clones from human and animal household members

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

ExPEC-typical virulence-associated genes correlate with successful colonization by intestinal E. coli in a small piglet group

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Role of Escherichia coli O157:H7 virulence factors in colonization at the bovine terminal rectal mucosa

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Escherichia coli interactions with Acanthamoeba: a symbiosis with environmental and clinical implications.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Grazing protozoa and the evolution of the Escherichia coli O157:H7 Shiga toxin-encoding prophage.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Caenorhabditis elegans as a simple model to study phenotypic and genetic virulence determinants of extraintestinal pathogenic Escherichia coli.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Prevalence and species distribution of E. Histolytica and E. Dispar in the Venda region, Limpopo, South Africa.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Protozoan predation, diversifying selection, and the evolution of antigenic diversity in Salmonella

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Structured habitats and the evolution of anticompetitor toxins in bacteria

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Local dispersal promotes biodiversity in a real-life game of rock-paper-scissors

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Integrons: agents of bacterial evolution.

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Integron-associated antibiotic resistance and phylogenetic grouping of Escherichia coli isolates from healthy subjects free of recent antibiotic exposure

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Role of the Ser-287-Asn replacement in the hydrolysis spectrum extension of AmpC beta-lactamases in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Multiple acquisitions of CTX-M plasmids in the rare D2 genotype of Escherichia coli provide evidence for convergent evolution

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Correlation between electrophoretic types B1 and B2 of carboxylesterase B and sex of patients in Escherichia coli urinary tract infections

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

O, K, and H antigens predict virulence factors, carboxylesterase B pattern, antimicrobial resistance, and host compromise among Escherichia coli strains causing urosepsis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Evolution of mammals and their gut microbes

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

A primitive T cell-independent mechanism of intestinal mucosal IgA responses to commensal bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Determination of Escherichia coli O types by allele-specific polymerase chain reaction: application to the O types involved in human septicemia.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Multilocus sequence typing

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Rapid and simple determination of the Escherichia coli phylogenetic group

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

The impact of next-generation sequencing technology on genetics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Population genomics of domestic and wild yeasts

31 March 2020

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https://api.crossref.org/works/10.1038%2FNRMICRO2298

Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Application of 'next-generation' sequencing technologies to microbial genetics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Inference of bacterial microevolution using multilocus sequence data

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348/69.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Cryptic lineages of the genus Escherichia

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO2298

Survival and Implantation of Escherichia coli in the Intestinal Tract

31 March 2020

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12 December 2020

Molecular evolution of the Escherichia coli chromosome. III. Clonal frames

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12 December 2020

Numbers of enterococci in water, sewage, and feces determined by the membrane filter technique with an improved medium

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12 December 2020

Molecular population genetics of Escherichia coli: DNA sequence diversity at the celC, crr, and gutB loci of natural isolates

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12 December 2020

Efficiency of various intestinal bacteria in assuming normal functions of enteric flora after association with germ-free mice.

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12 December 2020

Approximate Bayesian computation in population genetics

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12 December 2020

Comparative electrophoretic polymorphism of esterases and other enzymes in Escherichia coli

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12 December 2020

Molecular evolution of the Escherichia coli chromosome. VI. Two regions of high effective recombination.

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12 December 2020

Escherichia coli serotyping and disease in man and animals

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12 December 2020

Molecular evolution of the Escherichia coli chromosome. IV. Sequence comparisons

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12 December 2020

Genetic structure of natural populations of Escherichia coli in wild hosts on different continents

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12 December 2020

Association of carboxylesterase B electrophoretic pattern with presence and expression of urovirulence factor determinants and antimicrobial resistance among strains of Escherichia coli that cause urosepsis

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12 December 2020

The serology of the coli group

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12 December 2020

Estimation of growth rates of Escherichia coli BJ4 in streptomycin-treated and previously germfree mice by in situ rRNA hybridization

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12 December 2020

Genetic diversity in relation to serotype in Escherichia coli

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12 December 2020

Further observations on the persistence of individual strains of Escherichia coli in the intestinal tract of man.

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12 December 2020

Molecular evolution of the Escherichia coli chromosome. V. Recombination patterns among strains of diverse origin.

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12 December 2020

Spatial distribution of Escherichia coli in the mouse large intestine inferred from rRNA in situ hybridization

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12 December 2020

What's for dinner?: Entner-Doudoroff metabolism in Escherichia coli

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12 December 2020

Serotypes of Escherichia coli in normal stools.

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12 December 2020

Persistence of individual strains of Escherichia coli in the intestinal tract of man.

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12 December 2020

Comparative esterase electrophoretic polymorphism of Escherichia coli isolates obtained from animal and human sources.

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12 December 2020

Transduction, restriction and recombination patterns in Escherichia coli

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12 December 2020

[The fecal flora in man. I. Composition of the fecal flora of various age groups]

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12 December 2020

The global burden of diarrhoeal disease, as estimated from studies published between 1992 and 2000.

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12 December 2020

Recombination and population structure in Escherichia coli.

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12 December 2020

Methods of multilocus enzyme electrophoresis for bacterial population genetics and systematics

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12 December 2020

Genetic diversity and temporal variation in the E. coli population of a human host.

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12 December 2020

Standard reference strains of Escherichia coli from natural populations

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12 December 2020

The diversity of alleles at the hsd locus in natural populations of Escherichia coli

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12 December 2020

Molecular evolution of the Escherichia coli chromosome. II. Clonal segments

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12 December 2020

Identifiers

DOI

10.1038/NRMICRO2298

1 reference

Dimensions Publication ID

22 August 2017

1026159000

0 references

1 reference